[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 158 items for (author: wu & ym)

EMDB-18667:
Structure of human SPNS2 in LMNG
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

EMDB-18668:
Structure of human SPNS2 in DDM
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

PDB-8qv5:
Structure of human SPNS2 in LMNG
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

PDB-8qv6:
Structure of human SPNS2 in DDM
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

EMDB-50034:
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834
Method: single particle / : Debski-Antoniak OJ, Hurdiss DL

EMDB-50035:
SARS-CoV-2 M protein dimer (long form) in complex with Fab-E and incubated with CIM-834
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-9exa:
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834
Method: single particle / : Debski-Antoniak OJ, Hurdiss DL

EMDB-38574:
Cryo-EM structure of human dimeric APJR-Gi complex with apelin-13.
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

EMDB-38575:
Cryo-EM structure of human monomeric APJR-Gi complex with apelin-13.
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

EMDB-38578:
Cryo-EM structure of human dimeric Apelin receptor.
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

EMDB-38579:
Cryo-EM structure of human dimeric APJR complex with antagonistic antibody
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

EMDB-39810:
Cryo-EM structure of APJR complex with agonistic antibody
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

EMDB-39816:
Cryo-EM structure of APJR-Gi complex with agonistic antibody
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

PDB-8xqe:
Cryo-EM structure of human dimeric APJR-Gi complex with apelin-13.
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

PDB-8xqf:
Cryo-EM structure of human monomeric APJR-Gi complex with apelin-13.
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

PDB-8xqi:
Cryo-EM structure of human dimeric Apelin receptor.
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

PDB-8xqj:
Cryo-EM structure of human dimeric APJR complex with antagonistic antibody
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

PDB-8z74:
Cryo-EM structure of APJR complex with agonistic antibody
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

PDB-8z7j:
Cryo-EM structure of APJR-Gi complex with agonistic antibody
Method: single particle / : Yue Y, Liu LE, Wu LJ, Xu F

EMDB-38153:
Immunoglobulin (IgG) reconstruction using phase plate single-particle cryo-EM
Method: single particle / : Lin HH, Wang CH, Wu YM, Tu IP, Chang WH

EMDB-38154:
Fab domain of Immunoglobulin (IgG) reconstruction using phase plate single-particle cryo-EM
Method: single particle / : Lin HH, Wang CH, Wu YM, Tu IP, Chang WH

EMDB-38155:
Fab domain of Immunoglobulin (IgG) reconstruction using conventional single-particle cryo-EM
Method: single particle / : Lin HH, Wang CH, Wu YM, Tu IP, Chang WH

EMDB-41422:
CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1
Method: single particle / : Morano NC, Wu X, Shapiro L

EMDB-41441:
CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK2
Method: single particle / : Morano NC, Becker JE, Wu X, Shapiro L

EMDB-18334:
Cryo-EM structure of the inward-facing FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18335:
Cryo-EM structure of the inward-facing choline-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18336:
Cryo-EM structure of the inward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18337:
Cryo-EM structure of the outward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18339:
Cryo-EM structure of the inward-facing choline-bound FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-19009:
Cryo-EM structure of the inward-facing ethanolamine-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcs:
Cryo-EM structure of the inward-facing FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qct:
Cryo-EM structure of the inward-facing choline-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcx:
Cryo-EM structure of the inward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcy:
Cryo-EM structure of the outward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qd0:
Cryo-EM structure of the inward-facing choline-bound FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8r8t:
Cryo-EM structure of the inward-facing ethanolamine-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-41363:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

PDB-8tl6:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-16626:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (original map)
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16627:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (locally refined map of N-terminal and deacetylase domains)
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16629:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (locally refined map of deacetylase and sulfotransferase domains)
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16661:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb13 (original map)
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16662:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb13 (locally refined map of N-terminal and deacetylase domains)
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16663:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb13 (locally refined map of deacetylase and sulfotransferase domains)
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16664:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate and nanobody nAb13 (composite map and model).
Method: single particle / : Mycroft-West CJ, Wu L

PDB-8chs:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate and nanobody nAb13 (composite map and model).
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16564:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium and 3'-phosphoadenosine-5'-phosphosulfate
Method: single particle / : Mycroft-West CJ, Wu L

EMDB-16565:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (composite map and model)
Method: single particle / : Mycroft-West CJ, Wu L

PDB-8ccy:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium and 3'-phosphoadenosine-5'-phosphosulfate
Method: single particle / : Mycroft-West CJ, Wu L

PDB-8cd0:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (composite map and model)
Method: single particle / : Mycroft-West CJ, Wu L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more