[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 276 items for (author: wilkinson & r)

EMDB-47091:
Taeniopygia guttata R2 retrotransposon (R2Tg) initiating target-primed reverse transcription
Method: single particle / : Wilkinson ME, Edmonds KHK, Zhang F

EMDB-49523:
Cryo-EM structure of hexameric SenDRT9 RT-ncRNA complex
Method: single particle / : Burman N, Pandey S, Wiedenheft B, Sternberg SH

EMDB-49525:
Cryo-EM structure of the trimeric SenDRT9 RT-ncRNA complex (GST fusion)
Method: single particle / : Burman N, Pandey S, Wiedenheft B, Sternberg SH

PDB-9nlv:
Cryo-EM structure of hexameric SenDRT9 RT-ncRNA complex
Method: single particle / : Burman N, Pandey S, Wiedenheft B, Sternberg SH

PDB-9nlx:
Cryo-EM structure of the trimeric SenDRT9 RT-ncRNA complex (GST fusion)
Method: single particle / : Burman N, Pandey S, Wiedenheft B, Sternberg SH

EMDB-49053:
Structure of the retron IA complex with HNH nuclease in the "down" orientation
Method: single particle / : Burman N, Thomas-George J, Wilkinson R, Wiedenheft B

EMDB-49055:
Structure of the retron IA complex with HNH nuclease in the "up" orientation
Method: single particle / : Burman N, Thomas-George J, Wilkinson R, Wiedenheft B

EMDB-49056:
Structure of the Retron IA Complex without the HNH Nuclease
Method: single particle / : Burman N, Thomas-George J, Wilkinson R, Wiedenheft B

PDB-9n69:
Structure of the retron IA complex with HNH nuclease in the "down" orientation
Method: single particle / : Burman N, Thomas-George J, Wilkinson R, Wiedenheft B

PDB-9n6b:
Structure of the retron IA complex with HNH nuclease in the "up" orientation
Method: single particle / : Burman N, Thomas-George J, Wilkinson R, Wiedenheft B

PDB-9n6c:
Structure of the Retron IA Complex without the HNH Nuclease
Method: single particle / : Burman N, Thomas-George J, Wilkinson R, Wiedenheft B

EMDB-51951:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

EMDB-51952:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC5a) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

PDB-9h93:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

PDB-9h94:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC5a) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

EMDB-51442:
MukBEF in a nucleotide-bound state with open neck gate (heads core)
Method: single particle / : Burmann F, Lowe J

EMDB-51443:
MukBEF in a nucleotide-bound state with open neck gate (monomer)
Method: single particle / : Burmann F, Lowe J

EMDB-51444:
MukBEF in a nucleotide-bound state with open neck gate
Method: single particle / : Burmann F, Lowe J

EMDB-51445:
MukBEF in a DNA capture state
Method: single particle / : Burmann F, Lowe J

EMDB-51446:
MukBEF in a DNA capture state (dimer)
Method: single particle / : Burmann F, Lowe J

EMDB-51447:
MukEF in complex with the phage protein gp5.9
Method: single particle / : Burmann F, Wilkinson O, Kimanius D, Dillingham M, Lowe J

EMDB-51448:
MukEF in complex with the phage protein gp5.9 (focus)
Method: single particle / : Burmann F, Wilkinson O, Kimanius D, Dillingham M, Lowe J

PDB-9gm6:
MukBEF in a nucleotide-bound state with open neck gate (heads core)
Method: single particle / : Burmann F, Lowe J

PDB-9gm7:
MukBEF in a nucleotide-bound state with open neck gate (monomer)
Method: single particle / : Burmann F, Lowe J

PDB-9gm8:
MukBEF in a nucleotide-bound state with open neck gate
Method: single particle / : Burmann F, Lowe J

PDB-9gm9:
MukBEF in a DNA capture state
Method: single particle / : Burmann F, Lowe J

PDB-9gma:
MukBEF in a DNA capture state (dimer)
Method: single particle / : Burmann F, Lowe J

PDB-9gmb:
MukEF in complex with the phage protein gp5.9
Method: single particle / : Burmann F, Wilkinson O, Kimanius D, Dillingham M, Lowe J

PDB-9gmd:
MukEF in complex with the phage protein gp5.9 (focus)
Method: single particle / : Burmann F, Wilkinson O, Kimanius D, Dillingham M, Lowe J

EMDB-48616:
Structure of TIGR-TasR in complex with tigRNA and target DNA after DNA cleavage
Method: single particle / : Wilkinson ME, Zhang F

PDB-9mty:
Structure of TIGR-TasR in complex with tigRNA and target DNA after DNA cleavage
Method: single particle / : Wilkinson ME, Zhang F

EMDB-51726:
WT-IAPP cryo-EM structure Type SS - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

EMDB-51730:
WT-IAPP cryo-EM structure Type LL - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

EMDB-51733:
WT-IAPP cryo-EM structure Type LLU - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

EMDB-51734:
WT-IAPP cryo-EM structure Type LLUU - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

EMDB-51735:
WT-IAPP cryo-EM structure Type LL, doxazosin reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

EMDB-51736:
WT-IAPP cryo-EM structure Type LLU, doxazosin reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

EMDB-51737:
WT-IAPP cryo-EM structure Type LLUU, doxazosin reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

PDB-9gz6:
WT-IAPP cryo-EM structure Type SS - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

PDB-9gzp:
WT-IAPP cryo-EM structure Type LL - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

PDB-9gzs:
WT-IAPP cryo-EM structure Type LLU - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

PDB-9gzt:
WT-IAPP cryo-EM structure Type LLUU - control reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

PDB-9gzw:
WT-IAPP cryo-EM structure Type LL, doxazosin reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

PDB-9gzx:
WT-IAPP cryo-EM structure Type LLU, doxazosin reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

PDB-9gzy:
WT-IAPP cryo-EM structure Type LLUU, doxazosin reaction
Method: helical / : Wilkinson M, Taylor AIP, Xu Y, Chakraborty P, Brinkworth A, Willis LF, Zhuravleva A, Ranson NA, Foster R, Radford SE

EMDB-43682:
PbAbiF dimer bound to ncRNA
Method: single particle / : Wilkinson ME, Zilberzwige-Tal S, Altae-Tran H, Zhang F

PDB-8vz6:
PbAbiF dimer bound to ncRNA
Method: single particle / : Wilkinson ME, Zilberzwige-Tal S, Altae-Tran H, Zhang F

EMDB-47158:
Yeast post-catalytic P complex spliceosome, state II, overall map
Method: single particle / : Wilkinson ME, Hoskins AA

EMDB-47159:
Yeast post-catalytic P complex spliceosome, state III, overall map
Method: single particle / : Wilkinson ME, Hoskins AA

EMDB-47160:
Yeast post-catalytic P complex spliceosome, focussed refinement on Prp22
Method: single particle / : Wilkinson ME, Hoskins AA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more