[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 253 items for (author: wen & tl)

EMDB-45301:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-45302:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8d:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8e:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-51183:
Structure of human PHLPP2 in conformation 2
Method: single particle / : Siess K, Grishkovskaya I, Haselbach D, Leonard TA

EMDB-51182:
cryoEM map of human PHLPP2
Method: single particle / : Siess K, Grishkovskaya I, Haselbach D, Leonard TA

EMDB-60588:
Cryo-EM Structure of the 2:2 Complex of mGlu3 and beta-arrestin1
Method: single particle / : Wen TL, Du M, Yang X, Shen YQ

EMDB-60589:
Cryo-EM Structure of the 2:1 Complex of mGlu3 and beta-arrestin1
Method: single particle / : Wen TL, Du M, Yang X, Shen YQ

EMDB-60942:
Focused map of mGlu3 and beta-arrestin1 2:2 Compex ECD domain (PDB 9II2)
Method: single particle / : Wen TL, Yang X, Shen YQ

EMDB-60938:
consensus map of mGlu3 and beta-arrestin1 2:1 Compex (PDB 9II3)
Method: single particle / : Wen TL, Yang X, Shen YQ

EMDB-60939:
Focused map of mGlu3 and beta-arrestin1 2:1 Compex ECD domain (PDB 9II3)
Method: single particle / : Wen TL, Yang X, Shen YQ

EMDB-60940:
Focused map of mGlu3 and beta-arrestin1 2:1 Compex TM-barr1 part (PDB 9II3)
Method: single particle / : Wen TL, Yang X, Shen YQ

EMDB-60941:
consensus map of mGlu3 and beta-arrestin1 2:2 Compex (PDB 9II2)
Method: single particle / : Wen TL, Yang X, Shen YQ

EMDB-60943:
Focused map of mGlu3 and beta-arrestin1 2:2 Compex TM-barr1 part (PDB 9II2)
Method: single particle / : Wen TL, Yang X, Shen YQ

EMDB-62655:
Focused map of mGlu3 and beta-arrestin1 (7TM-barr1)
Method: single particle / : Wen TL, Yang X, Shen YQ

EMDB-45175:
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9c44:
SARS-CoV-2 S + S2L20
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9c45:
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-17295:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

PDB-8oyt:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

EMDB-17296:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

PDB-8oyu:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

EMDB-44587:
Cryo-EM Structure of the Helicobacter pylori dcagT PR
Method: single particle / : Roberts JR

EMDB-42290:
Cryo-EM Structure of the Helicobacter pylori CagYdAP OMC
Method: single particle / : Roberts JR

EMDB-42393:
Cryo-EM Structure of the Helicobacter pylori dcagM PR
Method: single particle / : Roberts JR

EMDB-43658:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43659:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43660:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vye:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyf:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyg:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-18941:
SARS-CoV-2 S (Spike) protein (BA.1) in complex with VHH Ma16B06 (sub-volume of two adjacent RBD-VHH modules)
Method: single particle / : Guttler T, Aksu M, Gorlich D

EMDB-40789:
BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI, Armache KJ

EMDB-40790:
Map focused on acidic patch BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI

EMDB-40791:
Overall map of BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI

PDB-8svf:
BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI, Armache KJ

EMDB-27781:
Cryo-EM structure of 227 Fab in complex with (NPNA)8 peptide
Method: single particle / : Martin GM, Ward AB

EMDB-27784:
Cryo-EM structure of 239 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

EMDB-27785:
Cryo-EM structure of 311 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

EMDB-27786:
Cryo-EM structure of 334 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

EMDB-27787:
Cryo-EM structure of 337 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

EMDB-27788:
Cryo-EM structure of 356 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

EMDB-27789:
Cryo-EM structure of 364 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

PDB-8dyt:
Cryo-EM structure of 227 Fab in complex with (NPNA)8 peptide
Method: single particle / : Martin GM, Ward AB

PDB-8dyw:
Cryo-EM structure of 239 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

PDB-8dyx:
Cryo-EM structure of 311 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

PDB-8dyy:
Cryo-EM structure of 334 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

PDB-8dz3:
Cryo-EM structure of 337 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

PDB-8dz4:
Cryo-EM structure of 356 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Method: single particle / : Martin GM, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more