[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 9,886 items for (author: wei & y)

EMDB-62892:
Human KCNQ2-CaM in complex with QO-58
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

PDB-9l8w:
Human KCNQ2-CaM in complex with QO-58
Method: single particle / : Zhao YW, Yang ZN, Du XN, Guo JT

EMDB-67630:
Cryo-EM map of SARS-CoV-2 spike complexed with Fab 12C2
Method: single particle / : Deng Z, Zhao H, Yu F

EMDB-65405:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

EMDB-65406:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

PDB-9vx1:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

PDB-9vx6:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

EMDB-60812:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60813:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60815:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60817:
Cryo-EM Structure of rRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60819:
Cryo-EM Structure of CRISPR
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-66729:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

EMDB-66731:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

PDB-9irf:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9irg:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9iri:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9xcf:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

PDB-9xcg:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

EMDB-53901:
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53902:
Semliki Forest virus trimer 1 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53903:
Semliki Forest virus trimer 2 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53904:
Composite density map of Semliki Forest virus in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53905:
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53906:
Semliki Forest virus trimer 1 in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53907:
Semliki Forest virus trimer 2 in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53908:
Composite density map of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

PDB-9rbq:
Semliki Forest virus trimer 1 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

PDB-9rbr:
Semliki Forest virus trimer 2 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-72178:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER, Lander GC

PDB-9q33:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER

EMDB-71244:
The consensus map of zebrafish TRPM5 with 1mM EDTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71245:
The open state of zebrafish TRPM5 with 1mM EDTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71246:
Zebrafish TRPM5 with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71247:
Zebrafish TRPM5 with 0.2mM calcium
Method: single particle / : Ruan Z, Du J, Lu W, Li Y

EMDB-71248:
Zebrafish TRPM5 with 1uM calcium
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71249:
Zebrafish TRPM5 with 2uM Ca in GDN detergent
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71250:
Zebrafish TRPM5 with 5mM EGTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71251:
Zebrafish TRPM5 D797A mutant with 5mM calcium
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71252:
Zebrafish TRPM5 D797A mutant with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71253:
Zebrafish TRPM5 D797N mutant with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71254:
Zebrafish TRPM5 with 5mM calcium and 0.5mM TPPO
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71255:
Zebrafish TRPM5 E337A mutant with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71256:
Zebrafish TRPM5 Q771A mutant with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71257:
Zebrafish TRPM5 Q771A mutant with 5mM calcium
Method: single particle / : Ruan Z, Du J, Lu W

PDB-9p3n:
The open state of zebrafish TRPM5 with 1mM EDTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

PDB-9p3o:
Zebrafish TRPM5 with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

PDB-9p3p:
Zebrafish TRPM5 with 5mM EGTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

PDB-9p3q:
Zebrafish TRPM5 D797A mutant with 5mM calcium
Method: single particle / : Ruan Z, Du J, Lu W

PDB-9p3r:
Zebrafish TRPM5 D797A mutant with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more