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Showing all 32 items for (author: toshimi & m)

EMDB-64083:
Cryo-EM structure of L-lysine 6-dehydrogenase
Method: single particle / : Funahashi T, Yamaguchi H, Suzuki S, Suzuki H, Nishikawa K, Kazutoshi T, Fujiyoshi Y, Sugiki M

EMDB-64084:
Cryo-EM structure of L-lysine 6-dehydrogenase complex with NAD+ and L-lysine
Method: single particle / : Funahashi T, Yamaguchi H, Suzuki S, Suzuki H, Nishikawa K, Kazutoshi T, Moemi T, Toshimi M, Hiroshi M, Fujiyoshi Y, Sugiki M

PDB-9uej:
Cryo-EM structure of L-lysine 6-dehydrogenase
Method: single particle / : Funahashi T, Yamaguchi H, Suzuki S, Suzuki H, Nishikawa K, Kazutoshi T, Fujiyoshi Y, Sugiki M

PDB-9uek:
Cryo-EM structure of L-lysine 6-dehydrogenase complex with NAD+ and L-lysine
Method: single particle / : Funahashi T, Yamaguchi H, Suzuki S, Suzuki H, Nishikawa K, Kazutoshi T, Moemi T, Toshimi M, Hiroshi M, Fujiyoshi Y, Sugiki M

EMDB-75113:
Chloroplast Glutamyl Peptidase S781R in closed-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

EMDB-75114:
Chloroplast Glutamyl Peptidase S781R in open-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

EMDB-75115:
Chloroplast Glutamyl Peptidase WT in open-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

EMDB-75116:
Chloroplast Glutamyl Peptidase S781R in open-open conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

EMDB-75117:
Chloroplast Glutamyl Peptidase WT in open-open conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

EMDB-75118:
Chloroplast Glutamyl Peptidase D855N in open-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

EMDB-75119:
Chloroplast Glutamyl Peptidase D855N in open-open conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

PDB-10eo:
Chloroplast Glutamyl Peptidase S781R in closed-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

PDB-10ep:
Chloroplast Glutamyl Peptidase S781R in open-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

PDB-10eq:
Chloroplast Glutamyl Peptidase WT in open-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

PDB-10er:
Chloroplast Glutamyl Peptidase S781R in open-open conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

PDB-10es:
Chloroplast Glutamyl Peptidase WT in open-open conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

PDB-10et:
Chloroplast Glutamyl Peptidase D855N in open-closed conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

PDB-10eu:
Chloroplast Glutamyl Peptidase D855N in open-open conformation
Method: single particle / : Ehrlich JJ, Routray P, van Wijk KJ, Kawate T

EMDB-45055:
Pannexin 1 lacking C-terminal activating domain
Method: single particle / : Ehrlich JJ, Kawate T

PDB-9bz7:
Pannexin 1 lacking C-terminal activating domain
Method: single particle / : Ehrlich JJ, Kawate T

EMDB-45056:
Pannexin 1 containing C-terminal activating domain
Method: single particle / : Ehrlich JJ, Kawate T

PDB-9bz8:
Pannexin 1 containing C-terminal activating domain
Method: single particle / : Ehrlich JJ, Kawate T

EMDB-36635:
Structure of arginine oxidase from Pseudomonas sp. TRU 7192
Method: single particle / : Yamaguchi H, Numoto N, Suzuki H, Nishikawa K, Kamegawa A, Takahashi K, Sugiki M, Fujiyoshi Y

PDB-8jt7:
Structure of arginine oxidase from Pseudomonas sp. TRU 7192
Method: single particle / : Yamaguchi H, Numoto N, Suzuki H, Nishikawa K, Kamegawa A, Takahashi K, Sugiki M, Fujiyoshi Y

EMDB-30007:
Cryo-EM structure of phosphoketolase from Bifidobacterium longum
Method: single particle / : Nakata K, Miyazaki N

PDB-6lxv:
Cryo-EM structure of phosphoketolase from Bifidobacterium longum
Method: single particle / : Nakata K, Miyazaki N, Yamaguchi H, Hirose M, Miyano H, Mizukoshi T, Kashiwagi T, Iwasaki K

EMDB-21150:
Cryo-EM structure of Xenopus tropicalis pannexin 1 channel
Method: single particle / : Syrjanen JL, Furukawa H

PDB-6vd7:
Cryo-EM structure of Xenopus tropicalis pannexin 1 channel
Method: single particle / : Syrjanen JL, Michalski M, Furukawa H, Kawate T

EMDB-9590:
structure of leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

EMDB-9592:
Structure of NAD+-bound leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

PDB-6acf:
structure of leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

PDB-6ach:
Structure of NAD+-bound leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

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External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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