[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,951 items for (author: ti & sc)

EMDB-70395:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9oed:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-46602:
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

PDB-9d74:
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

EMDB-55368:
Noc2-TAP pre-60S particle - state 2
Method: single particle / : Grundmann L, Gerhalter M, Prattes M, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-47792:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-47793:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9d:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9e:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-70231:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9o8m:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-46600:
CryoEM structure of anti-MHC-I Fab M1/42 complex with H2-Dd
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

EMDB-46601:
CryoEM structure of anti-MHC-I mAb B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Lei H, Huang R, Margulies DH

EMDB-70276:
CryoEM structure of anti-MHC-I mAb B1.23.2 Fc domains
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Huang R

PDB-9d72:
CryoEM structure of anti-MHC-I Fab M1/42 complex with H2-Dd
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

PDB-9d73:
CryoEM structure of anti-MHC-I mAb B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Lei H, Huang R, Margulies DH

PDB-9oa9:
CryoEM structure of anti-MHC-I mAb B1.23.2 Fc domains
Method: single particle / : Jiang J, Natarajan K, Margulies DH

EMDB-52584:
Cryo-EM structure of retron Eco2 (Ec67) in presence of Mg ions
Method: single particle / : Skorupskaite A, Jasnauskaite M, Malinauskaite L, Pausch P

EMDB-52583:
Cryo-EM structure of retron Eco2 (Ec67)
Method: single particle / : Jasnauskaite M, Miksys A, Skorupskaite A, Malinauskaite L, Pausch P

EMDB-53201:
Yeast pre-60S Domain II intermediate
Method: single particle / : Grundmann L, Gerhalter M, Prattes M, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-55356:
Noc2-TAP pre-60S particle - state 1
Method: single particle / : Grundmann L, Gerhalter M, Prattes M, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-55840:
Noc2-TAP pre-60S particle - state 3
Method: single particle / : Gerhalter M, Prattes M, Grundmann L, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-55843:
Noc2-TAP 90S particle - state A1
Method: single particle / : Gerhalter M, Prattes M, Grundmann L, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-55860:
Noc2-TAP 90S particle - state A2
Method: single particle / : Gerhalter M, Prattes M, Grundmann L, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-55874:
Noc2-TAP 90S particle - state A3
Method: single particle / : Gerhalter M, Prattes M, Grundmann L, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

PDB-9qjc:
Yeast pre-60S Domain II intermediate
Method: single particle / : Grundmann L, Gerhalter M, Prattes M, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-54920:
Cryo-EM structure of the catalytic core of human telomerase at the initiation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD, Yu H, Sigurdur TR, Ding Y

EMDB-54921:
Cryo-EM structure of the catalytic core of human telomerase at the elongation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD, Yu H, Sigurdur TR, Ding Y

EMDB-54922:
Cryo-EM structure of the catalytic core of human telomerase at the pre-termination state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD, Yu H, Sigurdur TR, Ding Y

PDB-9shy:
Cryo-EM structure of the catalytic core of human telomerase at the initiation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD

PDB-9shz:
Cryo-EM structure of the catalytic core of human telomerase at the elongation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD

PDB-9si0:
Cryo-EM structure of the catalytic core of human telomerase at the pre-termination state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD

EMDB-70791:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

PDB-9os2:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

EMDB-55519:
cryo-EM structure of CPSF160-WDR33-ZC3H18
Method: single particle / : Kuhn CC, Chand MK, Todesca S, Williams K, Keidel A, Garland W, Jensen TH, Conti E

PDB-9t3x:
cryo-EM structure of CPSF160-WDR33-ZC3H18
Method: single particle / : Kuhn CC, Chand MK, Todesca S, Williams K, Keidel A, Garland W, Jensen TH, Conti E

EMDB-53246:
Consensus refinement: Ternary complex of the human 20S proteasome in complex with Importin-9 and two homo dimers of Akirin-2. Focussed refinement
Method: single particle / : Brunner HL, Grundmann L, Haslelbach D

EMDB-53248:
Ternary complex of the human 20S proteasome in complex with Importin-9 and two homodimers of Akirin-2 - focussed refinement on Importin-9 and Akirin-2
Method: single particle / : Brunner HL, Grundmann L, David H

EMDB-53264:
Ternary complex of the human 20S proteasome in complex with Importin-9 and two homodimers of Akirin-2 - focussed refinement on the alpha subunits, Ipo-9 and Ak2
Method: single particle / : Brunner HL, Grundmann L, David H

EMDB-53265:
Composite map: Ternary complex of the human 20S proteasome in complex with Importin-9 and two homodimers of Akirin-2
Method: single particle / : Brunner HL, Grundmann L, David H

EMDB-53266:
Binary complex of human Importin-9 with one homodimer of Akirin-2
Method: single particle / : Brunner HL, Grundmann L, David H

EMDB-55520:
cryo-EM map of the human mPSF with FIP1
Method: single particle / : Kuhn CC, Chand MK, Todesca S, Williams K, Keidel A, Garland W, Jensen TH, Conti E

EMDB-74075:
Pseudomonas phage DEV delta-gp53 mutant neck and tail (portal, head-to-tail and tail tube proteins)
Method: single particle / : Bellis NF, Cingolani G

EMDB-74091:
Asymmetric Tail Gating Complex of Pseudomonas Phage DEV
Method: single particle / : Bellis NF, Cingolani G

PDB-9zdw:
Pseudomonas phage DEV delta-gp53 mutant neck and tail (portal, head-to-tail and tail tube proteins)
Method: single particle / : Bellis NF, Cingolani G

PDB-9ze4:
Asymmetric Tail Gating Complex of Pseudomonas Phage DEV
Method: single particle / : Bellis NF, Cingolani G

EMDB-52020:
Cryo-EM consensus map of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52021:
Cryo-EM focused refined map of the canine distemper virus dimer II region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52023:
Cryo-EM focused refined map of the canine distemper virus dimer I region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52024:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more