[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,600 items for (author: ti & sc)

EMDB-43514:
SPOT-RASTR - a cryo-EM specimen preparation technique that overcomes problems with preferred orientation and the air/water interface
Method: single particle / : Esfahani BG, Randolph P, Peng R, Grant T, Stroupe ME, Stagg SM

EMDB-42948:
Microtubule protofilament reconstruction in CCP5:microtubule class#1 complex
Method: single particle / : Chen J, Zehr EA, Gruschus JM, Szyk A, Liu Y, Tanner ME, Tjandra N, Roll-Mecak A

EMDB-44544:
Microtubule protofilament reconstruction in CCP5:microtubule class#2 complex
Method: single particle / : Chen J, Zehr EA, Gruschus JM, Szyk A, Liu Y, Tanner ME, Tjandra N, Roll-Mecak A

EMDB-44545:
Microtubule Protofilament reconstruction in CCP5:microtubule class#3 complex
Method: single particle / : Chen J, Zehr EA, Gruschus JM, Szyk A, Liu Y, Tanner ME, Tjandra N, Roll-Mecak A

EMDB-16860:
Ivabradine bound to HCN4 channel
Method: single particle / : Saponaro A, Chaves-Sanjuan A, Sharifzadeh AS, Clarke OB, Marabelli C, Bolognesi M, Thiel G, Moroni A

PDB-8ofi:
Ivabradine bound to HCN4 channel
Method: single particle / : Saponaro A, Chaves-Sanjuan A, Sharifzadeh AS, Clarke OB, Marabelli C, Bolognesi M, Thiel G, Moroni A

EMDB-51031:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51032:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51033:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51038:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-19397:
Composite map of the C. elegans Intron Lariat Spliceosome primed for disassembly (ILS')
Method: single particle / : Vorlaender MK, Rothe P, Plaschka C

EMDB-19398:
Structure of the C. elegans Intron Lariat Spliceosome double-primed for disassembly (ILS'')
Method: single particle / : Vorlaender MK, Rothe P, Plaschka C

PDB-8ro0:
Structure of the C. elegans Intron Lariat Spliceosome primed for disassembly (ILS')
Method: single particle / : Vorlaender MK, Rothe P, Plaschka C

PDB-8ro1:
Structure of the C. elegans Intron Lariat Spliceosome double-primed for disassembly (ILS'')
Method: single particle / : Vorlaender MK, Rothe P, Plaschka C

EMDB-43516:
Cryo-EM structure of HMPV (MPV-2cREKR)
Method: single particle / : Yu X, Langedijk JPM

EMDB-43517:
Cryo-EM structure of HMPV (MPV-2cREKR)
Method: single particle / : Yu X, Langedijk JPM

PDB-8vt2:
cryo-EM structure of HMPV (MPV-2c)
Method: single particle / : Yu X, Langedijk JPM

PDB-8vt3:
cryo-EM structure of HMPV (MPV-2cREKR)
Method: single particle / : Yu X, Langedijk JPM

EMDB-44482:
Cryo-EM structure of the HIV-1 JR-FL IDL Env trimer in complex with PGT122 Fab
Method: single particle / : Gorman J, Kwong PD

EMDB-44484:
Cryo-EM structure of the HIV-1 BG505 IDL Env trimer in complex with 3BNC117 and 10-1074 Fabs
Method: single particle / : Gorman J, Kwong PD

EMDB-44491:
Cryo-EM structure of the HIV-1 WITO IDL Env trimer in complex with PGT122 Fab
Method: single particle / : Gorman J, Kwong PD

PDB-9ber:
Cryo-EM structure of the HIV-1 JR-FL IDL Env trimer in complex with PGT122 Fab
Method: single particle / : Gorman J, Kwong PD

PDB-9bew:
Cryo-EM structure of the HIV-1 BG505 IDL Env trimer in complex with 3BNC117 and 10-1074 Fabs
Method: single particle / : Gorman J, Kwong PD

PDB-9bf6:
Cryo-EM structure of the HIV-1 WITO IDL Env trimer in complex with PGT122 Fab
Method: single particle / : Gorman J, Kwong PD

EMDB-44232:
GluA2 flip Q in complex with TARPgamma2 at pH8, consensus structure of LBD-TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

EMDB-44233:
GluA2 flip Q in complex with TARPgamma2 at pH8, consensus structure of TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

EMDB-44234:
GluA2 flip Q in complex with TARPgamma2 at pH5, consensus structure of LBD-TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

EMDB-44244:
GluA2 flip Q in complex with TARPgamma2 at pH5, consensus structure of TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

EMDB-44245:
GluA2 flip Q in complex with TARPgamma2 at pH5, class23, structure of LBD-TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

EMDB-44248:
GluA2 flip Q in complex with TARPgamma2 at pH8, class1, structure of LBD-TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

EMDB-44249:
GluA2 flip Q in complex with TARPgamma2 at pH8, class1, structure of NTD
Method: single particle / : Nakagawa T, Greger IH

EMDB-44250:
GluA2 flip Q in complex with TARPgamma2 at pH8, class12, structure of NTD
Method: single particle / : Nakagawa T, Greger IH

EMDB-44251:
GluA2 flip Q in complex with TARPgamma2 at pH8, class12, structure of LBD-TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

EMDB-18973:
Cryo-EM structure of Human SHMT1
Method: single particle / : Spizzichino S, Marabelli C, Bharadwaj A, Jakobi AJ, Chaves-Sanjuan A, Giardina G, Bolognesi M, Cutruzzola F

PDB-8r7h:
Cryo-EM structure of Human SHMT1
Method: single particle / : Spizzichino S, Marabelli C, Bharadwaj A, Jakobi AJ, Chaves-Sanjuan A, Giardina G, Bolognesi M, Cutruzzola F

EMDB-18990:
CryoEM map of tau PHF sarkosyl-extracted from a human AD patient (associated with in situ tomography)
Method: helical / : Wilkinson MW, Gilbert MAG, Fatima N, Jenkins J, O'Sullivan TJ, Schertel A, Halfon Y, Morrema THJ, Geibel M, Ranson NA, Radford SE, Hoozemans JJM, Frank RAW

EMDB-43762:
Aca2 from Pectobacterium phage ZF40 bound to RNA
Method: single particle / : Wilkinson ME, Birkholz N, Kimanius D, Fineran PC

EMDB-43435:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43436:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43437:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vq9:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vqa:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vqb:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-18950:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
Method: single particle / : Koller TO, Wilson DN

EMDB-19004:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
Method: single particle / : Koller TO, Wilson DN

PDB-8r6c:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
Method: single particle / : Koller TO, Wilson DN

PDB-8r8m:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
Method: single particle / : Koller TO, Wilson DN

EMDB-18689:
Maps of Collagen VI half- and full-beads
Method: single particle / : Schulte T, Speranzini V, Chaves-Sanjuan A, Ricagno S

EMDB-50270:
Cryo-EM structure of cardiac collagen-associated amyloid AL59
Method: helical / : Schulte T, Speranzini V, Chaves-Sanjuan A, Milazzo M, Ricagno S

PDB-9faa:
Cryo-EM structure of cardiac collagen-associated amyloid AL59
Method: helical / : Schulte T, Speranzini V, Chaves-Sanjuan A, Milazzo M, Ricagno S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more