[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 442 items for (author: thomas & lm)

EMDB-65360:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65361:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65362:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vue:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vuf:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vug:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-80237:
A complex of PTH1R/Gs bound to a PTHrP analogue with five beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

EMDB-80238:
A complex of PTH1R/Gs bound to a PTHrP analogue with three beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

PDB-25nv:
A complex of PTH1R/Gs bound to a PTHrP analogue with five beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

PDB-25nx:
A complex of PTH1R/Gs bound to a PTHrP analogue with three beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

EMDB-53970:
pre-Initiation Complex on ARS1 DNA (monomer)
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

EMDB-53971:
Pre-Initiation Complex on ARS1 DNA (dimer)
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-53972:
Phospho-DH bound by Sld3-MBD on ARS1 DNA
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-53973:
Phospho-MCM double hexamer bound to Sld3-Sld7-Cdc45 on ARS1 DNA
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-56897:
sCMGE assembled on ARS1 DNA with RPA and no Sld2
Method: single particle / : Puehringer T, Palm G, Costa A

EMDB-56898:
sCMGE assembled on ARS1 DNA with Sld2 and RPA
Method: single particle / : Palm G, Costa A

PDB-28vy:
sCMGE assembled on ARS1 DNA with Sld2 and RPA
Method: single particle / : Butryn A, Palm G, Costa A

PDB-9rhi:
pre-Initiation Complex on ARS1 DNA (monomer)
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

PDB-9rhj:
Pre-Initiation Complex on ARS1 DNA (dimer)
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

PDB-9rhl:
Phospho-DH bound by Sld3-MBD on ARS1 DNA
Method: single particle / : Puehringer T, Couves EC, Costa A

PDB-9rhm:
Phospho-MCM double hexamer bound to Sld3-Sld7-Cdc45 on ARS1 DNA
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-48337:
FnoCas12a bridge helix variant state 1
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48338:
FnoCas12a bridge helix variant state 2
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48339:
FnoCas12a bridge helix variant state 3
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48340:
FnoCas12a bridge helix variant state 4a
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48341:
FnoCas12a bridge helix variant state 4b
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-70233:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70234:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-70235:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70236:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8q:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8r:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8s:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8t:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54486:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor (unbudded region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54487:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor(bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54489:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54497:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-44747:
A broadly-neutralizing antibody against Ebolavirus glycoprotein that can potentiate the breadth and neutralization potency of other anti-glycoprotein antibodies
Method: single particle / : Donnellan FR, Rayaprolu V, Rijal P, O'Dowd V, Parvate A, Callaway H, Hariharan C, Parekh D, Hui S, Shaffer K, Hastie K, Shimanski L, Muller-Krauter H, Stecker T, Balaram A, Halfmann P, Saphire EO, Lightwood DJ, Townsend AR, Draper SJ

PDB-9bop:
A broadly-neutralizing antibody against Ebolavirus glycoprotein that can potentiate the breadth and neutralization potency of other anti-glycoprotein antibodies
Method: single particle / : Donnellan FR, Rayaprolu V, Rijal P, O'Dowd V, Parvate A, Callaway H, Hariharan C, Parekh D, Hui S, Shaffer K, Hastie K, Shimanski L, Muller-Krauter H, Stecker T, Balaram A, Halfmann P, Saphire EO, Lightwood DJ, Townsend AR, Draper SJ

EMDB-55190:
Human Methionine Synthase With Methyltetrahydrofolate, N-Half From Full-Length
Method: single particle / : Ferreira DSM, Yue WW, McCorvie TJ

EMDB-55191:
Human Methionine Synthase With Methyltetrahydrofolate, C-Half From Full-Length
Method: single particle / : Ferreira DSM, Yue WW, McCorvie TJ

EMDB-55192:
Human Methionine Synthase With Methyltetrahydrofolate, Hydroxocobalamin, and SAM, N-Half From Full-Length
Method: single particle / : Ferreira DSM, Yue WW, McCorvie TJ

EMDB-55193:
Human Methionine Synthase With Methyltetrahydrofolate, Hydroxocobalamin, and SAM, C-Half His-ON From Full-Length
Method: single particle / : Ferreira DSM, Yue WW, McCorvie TJ

EMDB-55194:
Human Methionine Synthase With Methyltetrahydrofolate, Hydroxocobalamin, and SAM, C-Half His-OFF From Full-Length
Method: single particle / : Ferreira DSM, Yue WW, McCorvie TJ

EMDB-55195:
Human Methionine Synthase With Methylcobalamin, N-Half From Full-Length
Method: single particle / : Ferreira DSM, Yue WW, McCorvie TJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more