[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 218 items for (author: teo & ew)

EMDB-42118:
Toxoplasma gondii apical end with ICMAP1 conditionally knocked down

EMDB-42119:
Toxoplasma gondii apical end with ICMAP2 conditionally knocked down

EMDB-42120:
Toxoplasma gondii apical end with ICMAP3i conditionally knocked down

EMDB-42121:
Toxoplasma gondii apical end with ICMAP3ii conditionally knocked down

EMDB-42527:
Pre-fusion Measles virus fusion protein complexed with Fab 77

EMDB-42539:
Structure of the Measles virus Fusion protein in the post-fusion conformation

EMDB-42593:
Structure of the Measles virus Fusion protein in the pre-fusion conformation

EMDB-42595:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11

EMDB-43827:
Fab 77-stabilized MeV F ectodomain fragment

PDB-8ut2:
Pre-fusion Measles virus fusion protein complexed with Fab 77

PDB-8utf:
Structure of the Measles virus Fusion protein in the post-fusion conformation

PDB-8uup:
Structure of the Measles virus Fusion protein in the pre-fusion conformation

PDB-8uuq:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11

PDB-9at8:
Fab 77-stabilized MeV F ectodomain fragment

EMDB-16512:
MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle

EMDB-16522:
Structure of ADDoCoV-ADAH11

PDB-8c9n:
MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle

EMDB-29396:
Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

EMDB-29836:
vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer

EMDB-29880:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1)

EMDB-29881:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2)

EMDB-29882:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3)

EMDB-29905:
vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer

PDB-8fr6:
Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

PDB-8g85:
vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer

PDB-8g9w:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1)

PDB-8g9x:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2)

PDB-8g9y:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3)

PDB-8gas:
vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer

EMDB-28726:
Rat 80S ribosome purified from brain RNA granules. Class 1 40S subunit 2_5A resolution

EMDB-28727:
Rat 80S ribosome purified from brain RNA granules. Class 1 60S subunit 2_5A resolution.

EMDB-26517:
Rat 80S ribosome purified from brain RNA granules. Class 2 40S subunit.

EMDB-26518:
Rat 80S ribosome purified from brain RNA granules. Class 2 60S subunit.

EMDB-29538:
Rat 80S ribosome purified from brain RNA granules. Class 1 80S consensus

EMDB-29539:
Rat 80S ribosome purified from brain RNA granules. Class 2 80S consensus

EMDB-29044:
Structure of Zanidatamab bound to HER2

PDB-8ffj:
Structure of Zanidatamab bound to HER2

EMDB-28558:
SARS-CoV-2 BA.1 spike ectodomain trimer in complex with the S2X324 neutralizing antibody Fab fragment (local refinement of the RBD and S2X324)

EMDB-28559:
SARS-CoV-2 Omicron BA.1 spike ectodomain trimer in complex with the S2X324 neutralizing antibody Fab fragment

PDB-8erq:
SARS-CoV-2 BA.1 spike ectodomain trimer in complex with the S2X324 neutralizing antibody Fab fragment (local refinement of the RBD and S2X324)

PDB-8err:
SARS-CoV-2 Omicron BA.1 spike ectodomain trimer in complex with the S2X324 neutralizing antibody Fab fragment

EMDB-24599:
Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 2M,N, Fig 3J, and Supp. Movie 1 of the manuscript Marcink et al., 2021).

EMDB-24600:
Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 2K,L, and Supp. Movie 2 of the manuscript Marcink et. al 2021,).

EMDB-24601:
Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 4B-E and Supp. Movie 3 of manuscript Marcink et al., 2021).

EMDB-24602:
Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig 2E-G of the manuscript Marcink et al., 2021).

EMDB-24603:
Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 3D,E of the manuscript Marcink et al., 2021).

EMDB-24604:
Tomogram of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein (Fig. 4H-J of the manuscript Marcink et al., 2021)

EMDB-26679:
Subtomogram averaged map of hACE2 dimers on the surface of extracellular vesicles

EMDB-25824:
aRML prion fibril

PDB-7td6:
aRML prion fibril

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more