[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 54 items for (author: sundquist & wi)

EMDB-42922:
Cellular CHMP1B/IST1 filaments - ClassIa
Method: helical / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42923:
Cellular CHMP1B/IST1 filaments - ClassIb
Method: helical / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42925:
Cellular CHMP1B/IST1 filament - Class Ic
Method: helical / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42926:
Cellular CHMP1B/IST1 filament - Class Id
Method: helical / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42927:
Cellular CHMP1B/IST1 filament - Class II
Method: helical / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42928:
Cellular CHMP1B/IST1 filament - Class III
Method: helical / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42929:
Cellular CHMP1B/IST1 filament - Class IV
Method: helical / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42930:
CHMP1B/IST1 ssRNA bound copolymer
Method: helical / : Talledge N, Laughlin TG, Alian A

EMDB-42931:
CryoEM of ssDNA bound CHMP1B/IST1 copolymer assembly
Method: helical / : Talledge N, Laughlin TG, Alian A

EMDB-42932:
CHMP1B/IST1 dsDNA bound copolymer
Method: helical / : Talledge N, Laughlin TG, Alian A

EMDB-42933:
Focused classification of dsDNA nucleic acid density from in vitro CHMP1B/IST1 copolymer filaments - Class1
Method: single particle / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42934:
Focused classification of dsDNA nucleic acid density from in vitro CHMP1B/IST1 copolymer filaments - Class2
Method: single particle / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42935:
Focused classification of dsDNA nucleic acid density from in vitro CHMP1B/IST1 copolymer filaments - Class4
Method: single particle / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42936:
Focused classification of dsDNA nucleic acid density from in vitro CHMP1B/IST1 copolymer filaments - Class5
Method: single particle / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-42937:
Focused classification of dsDNA nucleic acid density from in vitro CHMP1B/IST1 copolymer filaments - Class9
Method: single particle / : Talledge N, Laughlin TG, Alian A, McCullough J

EMDB-20588:
CryoEM reconstruction of membrane-bound ESCRT-III filament composed of CHMP1B+IST1 (right-handed)
Method: helical / : Nguyen HC, Frost A

EMDB-20589:
CryoEM reconstruction of membrane-bound ESCRT-III filament composed of CHMP1B+IST1 (left-handed)
Method: helical / : Nguyen HC, Frost A

EMDB-20590:
CryoEM reconstruction of membrane-bound ESCRT-III filament composed of CHMP1B only
Method: helical / : Nguyen HC, Frost A

EMDB-20591:
CryoEM reconstruction of ESCRT-III filament composed of IST1 NTD R16E K27E double mutant
Method: helical / : Nguyen HC, Frost A

EMDB-20327:
Spastin Hexamer in complex with substrate peptide
Method: single particle / : Han H, Schubert HL

EMDB-20805:
Spastin Hexamer (unsharpened map)
Method: single particle / : Han H, Schubert HL

EMDB-0443:
Vps4 with Cyclic Peptide Bound in the Central Pore
Method: single particle / : Han H, Fulcher JM

EMDB-20139:
Vps4 with Cyclic Peptide Bound in the Central Pore (Focused Classification of Subunit F, State1)
Method: single particle / : Han H, Fulcher JM, Shen PS, Hill CP

EMDB-20140:
Vps4 with Cyclic Peptide Bound in the Central Pore (Focused Classification of Subunit F, State2)
Method: single particle / : Han H, Fulcher JM, Shen PS, Hill CP

EMDB-20141:
Vps4 with Cyclic Peptide Bound in the Central Pore (Focused Classification of Subunit F, State3)
Method: single particle / : Han H, Fulcher JM, Shen PS, Hill CP

EMDB-20142:
Vps4 with Cyclic Peptide Bound in the Central Pore
Method: single particle / : Han H, Fulcher JM

EMDB-20144:
Vps4 with Cyclic Peptide Bound in the Central Pore (Map for Peptide cF30)
Method: single particle / : Han H, Fulcher JM, Shen PS, Hill CP

EMDB-20147:
Vps4 with Cyclic Peptide Bound in the Central Pore (Map for Peptide cFF30)
Method: single particle / : Han H, Fulcher JM, Shen PS, Hill CP

EMDB-9005:
CryoEM reconstruction of IST1-CHMP1B copolymer filament bound to ssDNA at 2.9 Angstrom resolution
Method: helical / : Talledge N, Frost A

EMDB-8887:
Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8888:
Unsharpened Map of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8889:
Focused classification map for high position subunit F of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8890:
Focused classification map for low position subunit F of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8891:
Focused classification map for VSL dimer bridging Subunit A and B of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8892:
Focused classification map for VSL dimer bridging Subunit B and C of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8893:
Focused classification map for VSL dimer bridging Subunit C and D of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8894:
Focused classification map for VSL dimer bridging Subunit D and E of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8895:
Focused classification map for VSL dimer bridging Subunit E and F of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8896:
Focused classification map for VSL dimer bridging Subunit F and A of Vps4p-Vta1p complex with peptide binding to the central pore of Vps4p
Method: single particle / : Han H, Monroe N

EMDB-8549:
Vps4-Vta1 complex
Method: single particle / : Monroe N, Shen P

EMDB-8550:
Vps4-Vta1 complex, sharpened map
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8551:
Vps4-HCP hexamer
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8552:
Vps4-Vta1 complex, VSL_A
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8553:
Vps4-Vta1 complex, VSL_B
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8554:
Vps4-Vta1 complex, VSL_C
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8555:
Vps4-Vta1 complex, VSL_D
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8556:
Vps4-Vta1 complex, VSL_E
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8557:
Vps4-Vta1 complex, VSL_F
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8570:
Vps4-Vta1 complex, State 3 of subunitF
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8571:
Vps4-Vta1 complex, State 2 of subunitF
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more