[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 665 items for (author: sun & hy)

EMDB-69143:
Cryo-EM structure of human ABCB7 in complex with CoPP:GSH/ADPVO4
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-69144:
Cryo-EM structures of the human ABCB7 in the apo state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-69145:
Cryo-EM structure of the human ABCB7 in occluded state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23pg:
Cryo-EM structure of human ABCB7 in complex with CoPP:GSH/ADPVO4
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23ph:
Cryo-EM structures of the human ABCB7 in the apo state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23pi:
Cryo-EM structure of the human ABCB7 in occluded state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-76895:
The Kaggle CryoET Object Identification Challenge: first place 80S ribosome
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-76896:
The Kaggle CryoET Object Identification Challenge: first place apo-ferritin
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-76898:
The Kaggle CryoET Object Identification Challenge: first place virus-like-particle
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-76899:
The Kaggle CryoET Object Identification Challenge: first place beta-galactosidase
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-76900:
The Kaggle CryoET Object Identification Challenge: first place beta-amylase
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-76901:
The Kaggle CryoET Object Identification Challenge: first place thyroglobulin
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-63748:
Cryo-EM structure of EBV gp350 D123 in complex with neutralizing antibody 1A12 and 1H5 and non-neutralizing antibody 2E9
Method: single particle / : Ma HY, Sun C

EMDB-63745:
Cryo-EM structure of EBV gp350 D123 in complex with neutralizing antibody 4A11
Method: single particle / : Ma HY, Sun C

EMDB-73884:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor1
Method: single particle / : Park S, Ward AB

EMDB-74737:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor3
Method: single particle / : Park S, Ward AB

EMDB-74738:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor8
Method: single particle / : Park S, Ward AB

EMDB-74739:
SARS-CoV-2 S2 in complex with COV2-2509
Method: single particle / : Park S, Ward AB

EMDB-74740:
Stabilized SARS-CoV-2 S2 apo
Method: single particle / : Park S, Ward AB

EMDB-75193:
SARS-CoV-2 spike S2 subunit in complex with polyclonal Fabs (Apex-A epitope)
Method: single particle / : Park S, Ward AB

EMDB-75194:
SARS-CoV-2 spike S2 subunit in complex with polyclonal Fabs (Apex-B epitope)
Method: single particle / : Park S, Ward AB

EMDB-75295:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor2
Method: single particle / : Park S, Ward AB

PDB-10mu:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor2
Method: single particle / : Park S, Ward AB

PDB-9z80:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor1
Method: single particle / : Park S, Ward AB

PDB-9zt5:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor3
Method: single particle / : Park S, Ward AB

PDB-9zt6:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor8
Method: single particle / : Park S, Ward AB

PDB-9zt7:
SARS-CoV-2 S2 in complex with COV2-2509
Method: single particle / : Park S, Ward AB

PDB-9zt8:
Stabilized SARS-CoV-2 S2 apo
Method: single particle / : Park S, Ward AB

EMDB-72964:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

EMDB-72965:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yha:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yhb:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

EMDB-53596:
Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Method: single particle / : Sundaramoorthy R, Hughes A, Owen-hughes TA

EMDB-53597:
Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Method: single particle / : Sundaramoorthy R, Hughes A, Owen-hughes TA

PDB-9r5w:
Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Method: single particle / : Sundaramoorthy R, Hughes A, Owen-hughes TA

EMDB-53590:
Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Method: single particle / : Sundaramoorthy R, Hughes A, Owen-hughes TA

EMDB-53595:
Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Method: single particle / : Sundaramoorthy R, Hughes A, Owen-hughes TA

PDB-9r5k:
Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Method: single particle / : Sundaramoorthy R, Hughes A, Owen-hughes TA

PDB-9r5s:
Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Method: single particle / : Sundaramoorthy R, Hughes A, Owen-hughes TA

EMDB-63533:
Cryo-EM structure of homomeric TRPC channel with agonists, class 1
Method: single particle / : Park H, Kim SH, Lee HH

EMDB-63534:
Cryo-EM structure of homomeric TRPC channel with agonists, class 2
Method: single particle / : Park H, Kim SH, Lee HH

PDB-9lzy:
Cryo-EM structure of homomeric TRPC channel with agonists, class 1
Method: single particle / : Park H, Kim SH, Lee HH

PDB-9lzz:
Cryo-EM structure of homomeric TRPC channel with agonists, class 2
Method: single particle / : Park H, Kim SH, Lee HH

EMDB-70318:
PV2-10D2 Complex
Method: single particle / : Waddey BT, Hafenstein SL

EMDB-70320:
SIPV3-2E1 Complex
Method: single particle / : Waddey BT, Hafenstein SL

EMDB-70339:
SIPV3-6B5 Complex
Method: single particle / : Waddey BT, Hafenstein SL

EMDB-70392:
SIPV1-5E12 Complex
Method: single particle / : Waddey BT, Hafenstein SL

PDB-9ocl:
PV2-10D2 Complex
Method: single particle / : Waddey BT, Hafenstein SL

PDB-9oco:
SIPV3-2E1 Complex
Method: single particle / : Waddey BT, Hafenstein SL

PDB-9od3:
SIPV3-6B5 Complex
Method: single particle / : Waddey BT, Hafenstein SL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more