[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 16,360 items for (author: su & l)

EMDB-70395:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9oed:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-46602:
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

PDB-9d74:
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

EMDB-64929:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:2:2
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

EMDB-64933:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:4:4
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

PDB-9vbo:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:2:2
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

PDB-9vbt:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:4:4
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

EMDB-65338:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in partial R-loop state
Method: single particle / : Ishihara K, Numata T

EMDB-65339:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 1
Method: single particle / : Ishihara K, Numata T

EMDB-65340:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 2
Method: single particle / : Ishihara K, Numata T

PDB-9vtp:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in partial R-loop state
Method: single particle / : Ishihara K, Numata T

PDB-9vtq:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 1
Method: single particle / : Ishihara K, Numata T

PDB-9vtr:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 2
Method: single particle / : Ishihara K, Numata T

EMDB-49844:
Structure of Nanchung-Inactive-Calmodulin in apo state
Method: single particle / : Fedor JG, Lee SY

EMDB-49845:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide
Method: single particle / : Fedor JG, Lee SY

EMDB-49846:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide, EDTA
Method: single particle / : Fedor JG, Lee SY

EMDB-49847:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen and calcium
Method: single particle / : Fedor JG, Lee SY

EMDB-49848:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen, EDTA
Method: single particle / : Fedor JG, Lee SY

EMDB-49849:
Structure of a pentameric Nanchung in complex with Afidopyropen
Method: single particle / : Fedor JG, Lee SY

PDB-9nvn:
Structure of Nanchung-Inactive-Calmodulin in apo state
Method: single particle / : Fedor JG, Lee SY

PDB-9nvo:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide
Method: single particle / : Fedor JG, Lee SY

PDB-9nvp:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide, EDTA
Method: single particle / : Fedor JG, Lee SY

PDB-9nvq:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen and calcium
Method: single particle / : Fedor JG, Lee SY

PDB-9nvr:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen, EDTA
Method: single particle / : Fedor JG, Lee SY

PDB-9nvs:
Structure of a pentameric Nanchung in complex with Afidopyropen
Method: single particle / : Fedor JG, Lee SY

EMDB-47792:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-47793:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9d:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9e:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-61220:
In situ structure of radial spoke 1 head in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Yin GL, Sun F

EMDB-61221:
In situ structure of radial spoke 1 base in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Yin GL, Sun F

EMDB-61222:
In situ structure of radial spoke 2 head in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Yin GL, Sun F

EMDB-61223:
In situ structure of radial spoke 2 base in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Yin GL, Sun F

EMDB-61224:
In situ structure of radial spoke 3 head in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Yin GL, Sun F

EMDB-61225:
In situ structure of radial spoke 3 base in the axoneme of mouse sperm
Method: subtomogram averaging / : Zhu Y, Yin GL, Sun F

EMDB-53472:
Cryo-EM structure of rat SLCO2A1 in the apo state.
Method: single particle / : Deme JC, Goult J, Lea SM, Newstead S

EMDB-53481:
Cryo-EM structure of rat SLCO2A1 bound to zafirlukast.
Method: single particle / : Joshi C, Newstead S

EMDB-53482:
Cryo-EM structure of rat SLCO2A1 bound to fentiazac.
Method: single particle / : Joshi C, Newstead S

EMDB-53483:
Cryo-EM structure of rat SLCO2A1 bound to losartan.
Method: single particle / : Joshi C, Newstead S

EMDB-53484:
Cryo-EM structure of rat SLCO2A1 bound to prostaglandin E2.
Method: single particle / : Deme JC, Goult J, Lea SM, Newstead S

EMDB-53485:
Cryo-EM structure of rat SLCO2A1 bound to dinoprost.
Method: single particle / : Deme JC, Joshi C, Lea SM, Newstead S

EMDB-53486:
Cryo-EM structure of rat SLCO2A1 bound to tolcapone.
Method: single particle / : Deme JC, Joshi C, Lea SM, Newstead S

EMDB-65402:
Cryo-EM structure of human papillomavirus type 45 in complexed with the Fab fragment of 10G2
Method: single particle / : Jiang Y, Sun H, Wang Z, Zheng Q, Li S, Xia N

EMDB-65403:
Local refinement region of HPV45 in complex with antibody A16E6
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S, Xia N

EMDB-65478:
Local refinement region of HPV45 in complex with antibody 10G2
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

EMDB-65612:
Cryo-EM structure of human papillomavirus type 45 in complexed with the Fab fragment of 20B8
Method: single particle / : Jiang Y, Sun H, Wang Z, Zheng Q, Li S

PDB-9vwz:
Local refinement region of HPV45 in complex with antibody A16E6
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

PDB-9vz8:
Local refinement region of HPV45 in complex with antibody 10G2
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

EMDB-56518:
PhiC31 integrase-attB-attP synaptic complex: attB-bound dimer subregion
Method: single particle / : Sun YE, Spagnolo L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more