[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 681 items for (author: stephanie & t)

EMDB-72146:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C02
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-72147:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-72149:
Structure of the Measles virus Hemagglutinin ectodomain in complex with two neutralizing antibodies 1C08 and 4D08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-72151:
Structure of the Measles virus Fusion glycoprotein ectodomain in complex with two neutralizing antibodies 4F09 and 3A12
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q1z:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C02
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q20:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q24:
Structure of the Measles virus Hemagglutinin ectodomain in complex with two neutralizing antibodies 1C08 and 4D08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q26:
Structure of the Measles virus Fusion glycoprotein ectodomain in complex with two neutralizing antibodies 4F09 and 3A12
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-71654:
EV-D68 in complex with G12 VHH
Method: single particle / : Klose T, Kuhn RJ

PDB-9pi7:
EV-D68 in complex with G12 VHH
Method: single particle / : Klose T, Kuhn RJ, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-75834:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

EMDB-75835:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

PDB-11mg:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

PDB-11mh:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

EMDB-71655:
EV-D68 in complex with G12 Fc
Method: single particle / : Klose T, Kuhn RJ

PDB-9pi8:
EV-D68 in complex with G12 Fc
Method: single particle / : Klose T, Kuhn RJ, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-73343:
Cryo-EM structure of the VPS13C N-terminal region in complex with Calmodulin
Method: single particle / : Li D, Reinisch KM

EMDB-73344:
Cryo-EM structure of the VPS13C C-terminal region
Method: single particle / : Li D, Reinisch KM

EMDB-73345:
Consensus map of full-length human VPS13C in complex with calmodulin
Method: single particle / : Li D, Reinisch KM

EMDB-73373:
Full-length human VPS13C in complex with calmodulin from the CryoEM composite map
Method: single particle / : Li D, Reinisch KM

PDB-9yqp:
Cryo-EM structure of the VPS13C N-terminal region in complex with Calmodulin
Method: single particle / : Li D, Reinisch KM

PDB-9yqq:
Cryo-EM structure of the VPS13C C-terminal region
Method: single particle / : Li D, Reinisch KM

PDB-9yrm:
CryoEM Structure of VPS13 protein, 1-1390 from C. thermophilum, in complex with calmodulin
Method: single particle / : Li D, Reinisch KM

PDB-9yrp:
Full-length human VPS13C in complex with calmodulin from the CryoEM composite map
Method: single particle / : Li D, Reinisch KM

EMDB-58124:
In situ subtomogram average of a ribosome bound to ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen (mNeon-KDEL)
Method: subtomogram averaging / : Carter SD, Jensen GJ, Freyberg Z

EMDB-69767:
Nerearchaeum marumarumayae interaction with gram negative bacterium
Method: electron tomography / : Johnson MD, Shepherd DC, Ghosal D

EMDB-69768:
Large cell body of Nerearchaeum marumarumayae
Method: electron tomography / : Johnson MD, Shepherd DC, Ghosal D

EMDB-69769:
Extended cell phenotype of Nerearchaeum marumarumayae
Method: electron tomography / : Johnson MD, Shepherd DC, Ghosal D

EMDB-55166:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

EMDB-55189:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (peptide)
Method: single particle / : Liang P, Zhang X

EMDB-56178:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (beta-barrel)
Method: single particle / : Liang P, Zhang X

EMDB-56179:
RAD51-dsDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

EMDB-56447:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54 N-terminus
Method: single particle / : Liang P, Zhang X

PDB-9srz:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

PDB-9ssl:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (peptide)
Method: single particle / : Liang P, Zhang X

PDB-9trl:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (beta-barrel)
Method: single particle / : Liang P, Zhang X

PDB-9trm:
RAD51-dsDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

PDB-9tyy:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54 N-terminus
Method: single particle / : Liang P, Zhang X

EMDB-72906:
Structure of GPR61 bound to inverse agonist compound 15
Method: single particle / : Lees JA, Dias JM, Han S

PDB-9yfu:
Structure of GPR61 bound to inverse agonist compound 15
Method: single particle / : Lees JA, Dias JM, Han S

EMDB-71324:
Cryo-EM structure of human integrin alpha5beta1 in complex with fibronectin (FN 7-10)
Method: single particle / : Ding J, Fantini D, Dedden D, Schumacher S, Biertumpfel C, Mizuno N

PDB-9p6s:
Cryo-EM structure of human integrin alpha5beta1 in complex with fibronectin (FN 7-10)
Method: single particle / : Ding J, Fantini D, Dedden D, Schumacher S, Biertumpfel C, Mizuno N

EMDB-70956:
In situ microtubule structure in the axon of a human neuron
Method: helical / : Zehr EA, Sun S, Roll-Mecak A

PDB-9ox7:
In situ microtubule structure in the axon of a human neuron
Method: helical / : Zehr EA, Sun S, Roll-Mecak A

EMDB-72877:
N4 Empty Particle C6 Tail
Method: single particle / : Bellis NF, Cingolani G

EMDB-72880:
N4 Full Virion Portal
Method: single particle / : Bellis NF, Cingolani G

PDB-9yf5:
N4 Empty Particle C6 Tail
Method: single particle / : Bellis NF, Cingolani G

PDB-9yf8:
N4 Full Virion Portal
Method: single particle / : Bellis NF, Cingolani G

EMDB-44492:
Cryo-EM structure of importin alpha-1/beta bound to FG repeats
Method: single particle / : Ko Y, Cingolani G

EMDB-49114:
Cryo-EM structure of human importin beta:Ran-GTP:RanBP1 trimeric complex
Method: single particle / : Ko Y, Cingolani G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more