[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 27 items for (author: singharoy & a)

EMDB-42690:
Heterochromatin protein 1 (HP1) alpha in complex with an H2A.Z nucleosome(focused refined map)
Method: single particle / : Tan D

EMDB-42692:
K9me3-H2A.Z nucleosome from focus refinement of the HP1-H2A.Z nucleosome complex
Method: single particle / : Tan D

EMDB-42773:
structure of the K9me3-H2A.Z nucleosome
Method: single particle / : Tan D

EMDB-42774:
Structure of Heterochromatin Protein 1 (HP1) alpha in complex with an H2A.Z nucleosome
Method: single particle / : Tan D, Sokolova V

PDB-8uxq:
Structure of Heterochromatin Protein 1 (HP1) alpha in complex with an H2A.Z nucleosome
Method: single particle / : Tan D, Sokolova V

EMDB-29395:
Subtomogram average of HuCoV-NL63 spike protein from purified intact virions
Method: subtomogram averaging / : Chen M, Chmielewski D, Schmid M, Jin J, Chiu W

PDB-8fr7:
A hinge glycan regulates spike bending and impacts coronavirus infectivity
Method: single particle / : Pintilie G, Wilson E, Chmielewski D, Schmid MF, Jin J, Chen M, Singharoy A, Chiu W

EMDB-24408:
The Capsid Structure of the ChAdOx1 viral vector/chimpanzee adenovirus Y25
Method: single particle / : Baker AT, Boyd RJ

PDB-7rd1:
The Capsid Structure of the ChAdOx1 viral vector/chimpanzee adenovirus Y25
Method: single particle / : Baker AT, Boyd RJ, Sarkar D, Vermaas JV, Williams D, Singharoy A

EMDB-30034:
2.7A Yeast Vo state3
Method: single particle / : Roh SH, Shekhar M

EMDB-30035:
3.6A Yeast Vo state3 prime
Method: single particle / : Roh SH, Shekhar M

PDB-6m0r:
2.7A Yeast Vo state3
Method: single particle / : Roh SH, Shekhar M, Pintilie G, Chipot C, Wilkens S, Singharoy A, Chiu W

PDB-6m0s:
3.6A Yeast Vo state3 prime
Method: single particle / : Roh SH, Shekhar M, Pintilie G, Chipot C, Wilkens S, SIngharoy A, Chiu W

EMDB-20486:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots
Method: single particle / : Dashti A, des Georges A

EMDB-22392:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 42 - State 6 (S6)
Method: single particle / : Dashti A, des Georges A

EMDB-22393:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 22 - State 2 (S2)
Method: single particle / : Dashti A, des Georges A

EMDB-22394:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 35 - State 4 (S4)
Method: single particle / : Dashti A, des Georges A

EMDB-22395:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 29 - State 3 (S3)
Method: single particle / : Dashti A, des Georges A

EMDB-22396:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 37 - State 5 (S5)
Method: single particle / : Dashti A, des Georges A

PDB-6pv6:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots
Method: single particle / : Dashti A, des Georges A, Frank J, Ourmazd A

PDB-7jmf:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 42 - State 6 (S6)
Method: single particle / : Dashti A, des Georges A, Frank J, Ourmazd A

PDB-7jmg:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 22 - State 2 (S2)
Method: single particle / : Dashti A, des Georges A, Frank J, Ourmazd A

PDB-7jmh:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 35 - State 4 (S4)
Method: single particle / : Dashti A, des Georges A, Frank J, Ourmazd A

PDB-7jmi:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 29 - State 3 (S3)
Method: single particle / : Dashti A, des Georges A, Frank J, Ourmazd A

PDB-7jmj:
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 37 - State 5 (S5)
Method: single particle / : Dashti A, des Georges A, Frank J, Ourmazd A

PDB-4utq:
A structural model of the active ribosome-bound membrane protein insertase YidC
Method: single particle / : Wickles S, Singharoy A, Andreani J, Seemayer S, Bischoff L, Berninghausen O, Soeding J, Schulten K, vanderSluis EO, Beckmann R

EMDB-2705:
A structural model of the active ribosome-bound membrane protein insertase YidC
Method: single particle / : Wickles S, Singharoy A, Andreani J, Seemayer S, Bischoff L, Berninghausen O, Soeding J, Schulten K, van der Sluis EO, Beckmann R

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more