[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 530 items for (author: simone & c)

EMDB-43745:
SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B
Method: single particle / : Yin Y, Van Damme E

PDB-8w2e:
SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B
Method: single particle / : Yin Y, Van Damme E

EMDB-47889:
Cryo-EM structure of USP1-UAF1-Ubiquitin in complex with TNG348
Method: single particle / : Whittington DA

PDB-9ebs:
Cryo-EM structure of USP1-UAF1-Ubiquitin in complex with TNG348
Method: single particle / : Whittington DA

EMDB-50811:
Xenopus borealis undecorated microtubule - 15 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

EMDB-50941:
Xenopus borealis undecorated microtubule - 14 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

EMDB-50942:
Xenopus laevis undecorated microtubule - 14 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

EMDB-50943:
Xenopus laevis undecorated microtubule - 15 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

EMDB-50945:
Xenopus laevis undecorated microtubule - 15 protofilament, 4-start helix
Method: single particle / : Troman LA, Moores CA

EMDB-50946:
Xenopus tropicalis undecorated microtubule - 14 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

EMDB-50947:
Xenopus tropicalis undecorated microtubule - 15 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

PDB-9fvj:
Xenopus borealis undecorated microtubule - 15 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

PDB-9g0o:
Xenopus borealis undecorated microtubule - 14 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

PDB-9g0p:
Xenopus laevis undecorated microtubule - 14 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

PDB-9g0q:
Xenopus laevis undecorated microtubule - 15 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

PDB-9g0r:
Xenopus laevis undecorated microtubule - 15 protofilament, 4-start helix
Method: single particle / : Troman LA, Moores CA

PDB-9g0s:
Xenopus tropicalis undecorated microtubule - 14 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

PDB-9g0t:
Xenopus tropicalis undecorated microtubule - 15 protofilament, 3-start helix
Method: single particle / : Troman LA, Moores CA

EMDB-47265:
CoREST complex bound to U2AF2
Method: single particle / : Hicks CW, Alani RM

PDB-9dwu:
CoREST complex bound to U2AF2
Method: single particle / : Hicks CW, Alani RM

EMDB-51002:
Untethered Cytoplasmic Fission Yeast Ribosome
Method: subtomogram averaging / : Rosa H, Gemin O, Gluc M, Mattei S, Jomaa A

EMDB-18989:
human connexin36 gap junction channel in complex with quinidine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

PDB-8r7r:
human connexin36 gap junction channel in complex with quinidine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

EMDB-43970:
Non-translating Schizosaccharomyces pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43971:
Non-translating Schizosaccharomyces pombe ribosome small subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43972:
Non-translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43973:
Non-translating S. pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43974:
Translating Schizosaccharomyces pombe ribosome small subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43975:
Translating Schizosaccharomyces pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43976:
Translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-50266:
Cytoplasmic Fission Yeast Ribosome Tethered to the Outer Mitochondrial Membrane
Method: subtomogram averaging / : Gemin O, Gluc M, Rosa H, Mattei S, Jomaa A

EMDB-51030:
Untethered Cytoplasmic Fission Yeast Ribosome (S. pombe)
Method: subtomogram averaging / : Rosa H, Gemin O, Gluc M, Mattei S, Jomaa A

PDB-9axt:
Non-translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

PDB-9axu:
Non-translating S. pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

PDB-9axv:
Translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-19774:
Coxsackievirus A9 bound with compound 20 (CL300)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

EMDB-50039:
Coxsackievirus A9 bound with compound 14 (CL275)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

EMDB-50269:
Coxsackievirus A9 bound with compound 16 (CL298)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

EMDB-50324:
Coxsackievirus A9 bound with compound 17 (CL301)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

EMDB-50414:
Coxsackievirus A9 bound with compound 18 (CL304)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

EMDB-50614:
Coxsackievirus A9 bound with compound 15 (CL278)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

EMDB-50617:
Coxsackievirus A9 bound with compound 19 (CL313)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

EMDB-50636:
Coxsackievirus A9 bound with CL213.
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

PDB-8s7j:
Coxsackievirus A9 bound with compound 20 (CL300)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

PDB-9exi:
Coxsackievirus A9 bound with compound 14 (CL275)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

PDB-9fa9:
Coxsackievirus A9 bound with compound 16 (CL298)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

PDB-9fcz:
Coxsackievirus A9 bound with compound 17 (CL301)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

PDB-9fgn:
Coxsackievirus A9 bound with compound 18 (CL304)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

PDB-9fo2:
Coxsackievirus A9 bound with compound 15 (CL278)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

PDB-9fo5:
Coxsackievirus A9 bound with compound 19 (CL313)
Method: single particle / : Plavec Z, Butcher SJ, Mitchell C, Buckner C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more