[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 100 items for (author: schauer & gd)


EMDB entry, No image

EMDB-36836:
Cryo-EM structure of the human 55S mitoribosome with Tigecycline
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-36837:
Cryo-EM structure of the human 39S mitoribosome with Tigecycline
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-36838:
Cryo-EM structure of the human 80S ribosome with Tigecycline
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-36839:
Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A
Method: single particle / : Buschauer R, Beckmann R, Cheng J


EMDB entry, No image

EMDB-36945:
Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA
Method: single particle / : Buschauer R, Beckmann R, Cheng J


EMDB entry, No image

EMDB-38629:
Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38630:
Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38631:
Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38632:
Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38633:
Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38634:
Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38635:
Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38636:
Cryo-EM structure of the human 55S mitoribosome with 5uM Tigecycline (focusing on 39S ribosome)
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38637:
Cryo-EM structure of the human 55S mitoribosome with 5uM Tigecycline (focusing on 28S ribosome head)
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38638:
Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline (focusing on 39S ribosome)
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-38639:
Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline (focusing on 28S ribosome head)
Method: single particle / : Li X, Wang M, Cheng J


EMDB entry, No image

EMDB-39455:
Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline
Method: single particle / : Li X, Wang M, Denk T, Cheng J


EMDB entry, No image

EMDB-39456:
Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline
Method: single particle / : Li X, Wang M, Denk T, Cheng J

PDB-8k2a:
Cryo-EM structure of the human 55S mitoribosome with Tigecycline
Method: single particle / : Li X, Wang M, Cheng J

PDB-8k2b:
Cryo-EM structure of the human 39S mitoribosome with Tigecycline
Method: single particle / : Li X, Wang M, Cheng J

PDB-8k2c:
Cryo-EM structure of the human 80S ribosome with Tigecycline
Method: single particle / : Li X, Wang M, Cheng J

PDB-8k2d:
Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A
Method: single particle / : Buschauer R, Beckmann R, Cheng J

PDB-8k82:
Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA
Method: single particle / : Buschauer R, Beckmann R, Cheng J

PDB-8xsx:
Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2
Method: single particle / : Li X, Wang M, Cheng J

PDB-8xsy:
Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)
Method: single particle / : Li X, Wang M, Cheng J

PDB-8xsz:
Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA
Method: single particle / : Li X, Wang M, Cheng J

PDB-8xt0:
Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline
Method: single particle / : Li X, Wang M, Cheng J

PDB-8xt1:
Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline
Method: single particle / : Li X, Wang M, Cheng J

PDB-8xt2:
Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline
Method: single particle / : Li X, Wang M, Cheng J

PDB-8xt3:
Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline
Method: single particle / : Li X, Wang M, Cheng J

PDB-8yoo:
Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline
Method: single particle / : Li X, Wang M, Denk T, Cheng J

PDB-8yop:
Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline
Method: single particle / : Li X, Wang M, Denk T, Cheng J

EMDB-16470:
Cryo-EM structure of in vitro reconstituted Otu2-bound Ub-40S complex - body 1
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

EMDB-16471:
in vitro reconstituted yeast 40S ribosome complex with deubiquitinating enzyme Otu2 bound to ubiquitinated eS7 - body 2 (40S head)
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

EMDB-16525:
Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

EMDB-16533:
Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

EMDB-16541:
Yeast cytoplasmic pre-40S ribosome biogenesis complex with deubiquitinating enzyme Otu2
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

EMDB-16542:
Local refinement map of Otu2 N-terminal domain bound to yeast 40S ribosome
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

EMDB-16548:
Local refinement map of Otu2 C-terminal domain bound to ubiquitinated eS7 on yeast 40S ribosome
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

PDB-8c83:
Cryo-EM structure of in vitro reconstituted Otu2-bound Ub-40S complex
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

PDB-8cah:
Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

PDB-8cas:
Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

PDB-8cbj:
Cryo-EM structure of Otu2-bound cytoplasmic pre-40S ribosome biogenesis complex
Method: single particle / : Ikeuchi K, Buschauer R, Cheng J, Berninghausen O, Becker T, Beckmann R

EMDB-13180:
Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)
Method: single particle / : Buschauer R, Komar T

PDB-7p3k:
Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)
Method: single particle / : Buschauer R, Komar T, Becker T, Berninghausen O, Cheng J, Beckmann R

EMDB-12936:
Cryo-EM structure of 70S ribosome stalled with TnaC peptide
Method: single particle / : Su T, Kudva R

EMDB-12937:
Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2
Method: single particle / : Su T, Kudva R

PDB-7oiz:
Cryo-EM structure of 70S ribosome stalled with TnaC peptide
Method: single particle / : Su T, Kudva R, Becker T, Berninghausen O, Heijne G, Cheng J, Beckmann R

PDB-7oj0:
Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2
Method: single particle / : Su T, Kudva R, Becker T, Berninghausen O, Heijne G, Cheng J, Beckmann R

EMDB-11292:
SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex
Method: single particle / : Thoms M, Buschauer R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more