[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 112 items for (author: scharf & l)

EMDB-53969:
FZD7 in complex with negative allosteric modulator C407
Method: single particle / : Scharf MM, Graetz L, Kinsolving J, Voss J, Carrasco-Busturia D, Forsberg B, Kolb P, Schulte G

PDB-9rhg:
FZD7 in complex with negative allosteric modulator C407
Method: single particle / : Scharf MM, Graetz L, Kinsolving J, Voss J, Carrasco-Busturia D, Forsberg B, Kolb P, Schulte G

EMDB-71585:
Negative stain EM map of EBV glycoprotein gH/gL in complex with glycoprotein gp42 and FAB ATX-42-1.1 open conformation
Method: single particle / : Lang K, Kher G, Chan CB, Pancera M

EMDB-71586:
Negative stain EM map of EBV glycoprotein gH/gL in complex with glycoprotein gp42 and FAB ATX-42-2 Open conformation
Method: single particle / : Lang K, Kher G, Chan CB, Pancera M

EMDB-71587:
Negative stain EM map of EBV glycoprotein gH/gL in complex with glycoprotein gp42 and FAB ATX-42-1.1 partially open conformation
Method: single particle / : Lang K, Kher G, Chan CB, Pancera M

EMDB-71588:
Negative stain EM map of EBV glycoprotein gH/gL in complex with glycoprotein gp42 and FAB ATX-42-2 closed conformation
Method: single particle / : Lang K, Kher G, Chan CB, Pancera M

EMDB-71589:
Negative stain EM map of EBV glycoprotein gH/gL in complex with glycoprotein gp42 and HLA-DR1 Beta chain
Method: single particle / : Lang K, Duy M, Pancera M

EMDB-71590:
Negative Stain EM map of EBV glycoprotein gp350 in complex with ATX-350-1 FAB and 72A1 FAB
Method: single particle / : Lang K, Pancera M

EMDB-71592:
Negative Stain EM map of EBV glycoprotein gp350 in complex with ATX-350-2 FAB
Method: single particle / : Lang K, Kher G, Aldridge NT, Pancera M

EMDB-71593:
Negative Stain EM map of EBV glycoprotein gp350 in complex with ATX-350-1 FAB
Method: single particle / : Lang K, Pancera M

EMDB-71594:
Negative Stain EM map of EBV glycoprotein gp350 in complex with 72A1 FAB
Method: single particle / : Lang K, Pancera M

EMDB-72129:
Negative Stain EM map of KSHV glycoprotein gH and gL
Method: single particle / : Kher G, Aldridge NT, Lang K, Pancera M

EMDB-72130:
Negative Stain EM map of KSHV glycoprotein gHgL in complex with MLKH1 FAB
Method: single particle / : Kher G, Aldridge NT, Lang K, Pancera M

EMDB-72131:
Negative Stain EM map of KSHV glycoprotein gHgL in complex with MLKH5 FAB
Method: single particle / : Kher G, Aldridge NT, Lang K, Pancera M

EMDB-72132:
Negative Stain EM map of KSHV glycoprotein gHgL in complex with MLKH5, MLKH10 and MLKH3 FABs.
Method: single particle / : Lang K, Aldridge NT, Pancera M

EMDB-72133:
Negative Stain EM map of KSHV glycoprotein gHgL in complex with MLKH5, MLKH10 and MLKH6 FABs
Method: single particle / : Lang K, Aldridge NT, Pancera M

EMDB-72525:
Negative Stain EM map of KSHV glycoprotein gHgL in complex with MLKH5 , MLKH10 and MLKH12 FABs.
Method: single particle / : Lang K, Aldridge N, Pancera M

EMDB-73789:
Cryo-EM structure of KSHV glycoprotein gHgL in complex with MLKH3 and MLKH10 FABs
Method: single particle / : Lang K, Aldridge N, Pancera M

PDB-9z3q:
Cryo-EM structure of KSHV glycoprotein gHgL in complex with MLKH3 and MLKH10 FABs
Method: single particle / : Lang K, Aldridge N, Pancera M

EMDB-52521:
Agrobacterium phage 7-7-1 tail
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

EMDB-52522:
Agrobacterium phage 7-7-1 capsid
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

EMDB-53352:
Cryo-tomogram of Agrobacterium phage 7-7-1 and Agrobacterium sp. H13-3
Method: electron tomography / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

EMDB-54017:
Agrobacterium phage 7-7-1 portal
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54018:
Agrobacterium phage 7-7-1 neck 1
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54019:
Agrobacterium phage 7-7-1 neck 2 + tail terminator + tail sheath + tail tube
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54020:
Agrobacterium phage 7-7-1 collar
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54021:
Agrobacterium phage 7-7-1 baseplate
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54022:
Agrobacterium phage 7-7-1 tail spike
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9hz7:
Agrobacterium phage 7-7-1 tail
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

PDB-9hz8:
Agrobacterium phage 7-7-1 capsid
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

PDB-9rkq:
Agrobacterium phage 7-7-1 portal
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rkr:
Agrobacterium phage 7-7-1 neck 1
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rks:
Agrobacterium phage 7-7-1 neck 2 + tail terminator + tail sheath + tail tube
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rkt:
Agrobacterium phage 7-7-1 collar
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rku:
Agrobacterium phage 7-7-1 baseplate
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rkv:
Agrobacterium phage 7-7-1 tail fibers
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-19881:
High resolution structure of FZD7 in inactive conformation
Method: single particle / : Bous J, Kinsolving J, Gratz L, Scharf MM, Voss J, Selcuk B, Adebali O, Schulte G

PDB-9epo:
High resolution structure of FZD7 in inactive conformation
Method: single particle / : Bous J, Kinsolving J, Gratz L, Scharf MM, Voss J, Selcuk B, Adebali O, Schulte G

PDB-9ew2:
High resolution structure of FZD7 in complex with miniGs protein
Method: single particle / : Bous J, Kinsolving J, Gratz L, Scharf MM, Voss J, Selcuk B, Adebali O, Schulte G

EMDB-43243:
Cryo-EM of neck of bacteriophage Chi
Method: single particle / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

EMDB-43278:
Cryo-EM of tail of bacteriophage Chi
Method: helical / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

EMDB-43281:
Cryo-EM of tail-tip of bacteriophage Chi
Method: single particle / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

EMDB-43282:
Cryo-EM of capsid of bacteriophage Chi
Method: single particle / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

PDB-8vhx:
Cryo-EM of neck of bacteriophage Chi
Method: single particle / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

PDB-8vja:
Cryo-EM of tail of bacteriophage Chi
Method: helical / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

PDB-8vjh:
Cryo-EM of tail-tip of bacteriophage Chi
Method: single particle / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

PDB-8vji:
Cryo-EM of capsid of bacteriophage Chi
Method: single particle / : Sonani RR, Esteves NC, Scharf BE, Egelman EH

EMDB-29383:
Structure of baseplate with receptor binding complex of Agrobacterium phage Milano
Method: single particle / : Sonani RR, Leiman PG, Wang F, Kreutzberger MAB, Sebastian A, Esteves NC, Kelly RJ, Scharf B, Egelman EH

PDB-8fqc:
Structure of baseplate with receptor binding complex of Agrobacterium phage Milano
Method: single particle / : Sonani RR, Leiman PG, Wang F, Kreutzberger MAB, Sebastian A, Esteves NC, Kelly RJ, Scharf B, Egelman EH

EMDB-29353:
Structure of Agrobacterium tumefaciens bacteriophage Milano curved tail
Method: single particle / : Sonani RR, Leiman PG, Wang F, Kreutzberger MAB, Sebastian A, Esteves NC, Kelly RJ, Scharf B, Egelman EH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more