[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 56 items for (author: saura & p)

EMDB-55748:
E. coli Complex I WT purified in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

EMDB-55749:
Local refinement of E. coli Complex I WT membrane domain in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

EMDB-55750:
Local refinement of E. coli Complex I WT hydrophilic domain in LMNG
Method: single particle / : Kovalova T, Beghiah A, Kaila VRI

EMDB-55751:
E. coli Complex I D79N NuoA mutant purified in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila V

EMDB-55752:
Local refinement of E. coli Complex I D79N NuoA mutant hydrophilic domain in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila VRI

EMDB-55753:
Local refinement of E. coli Complex I D79N NuoA mutant membrane domain in LMNG
Method: single particle / : Beghiah A, Kovalova T, Kaila VRI

EMDB-45579:
Yeast 26S proteasome non-substrate-engaged (S1 state)
Method: single particle / : Arkinson C, Gee CL, Martin A

PDB-9cgc:
Yeast 26S proteasome non-substrate-engaged (S1 state)
Method: single particle / : Arkinson C, Gee CL, Martin A

PDB-9i3i:
Cryo-EM structure of the MCM-ORC (MO) complex featuring an ORC2 regulatory domain involved in cell cycle regulation of MCM-DH loading for DNA replication.
Method: single particle / : Miller TCR, Lim CT, Diffley JFX, Costa A

EMDB-46902:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin precursor 5.3
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

EMDB-47968:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2, open conformation
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

PDB-9dia:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

PDB-9ef2:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2, open conformation
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

EMDB-19915:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii bound to NADH
Method: single particle / : Kumar A, Schuller JM

EMDB-19916:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential Ferredoxin
Method: single particle / : Kumar A, Schuller JM

EMDB-19919:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential ferredoxin (consensus map)
Method: single particle / : Kumar A, Schuller JM

EMDB-19920:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii in apo state
Method: single particle / : Kumar A, Schuller JM

PDB-9eri:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii bound to NADH
Method: single particle / : Kumar A, Schuller JM

PDB-9erj:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential Ferredoxin
Method: single particle / : Kumar A, Schuller JM

PDB-9erk:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential ferredoxin (consensus map)
Method: single particle / : Kumar A, Schuller JM

PDB-9erl:
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii in apo state
Method: single particle / : Kumar A, Schuller JM

EMDB-19186:
Cryo-EM structure of the MCM double hexamer loaded onto dsDNA.
Method: single particle / : Miller TCR, Lim CT, Diffley JFX, Costa A

EMDB-19187:
Cryo-EM structure of an MCM helicase single hexamer loaded onto dsDNA.
Method: single particle / : Miller TCR, Lim CT, Diffley JFX, Costa A

PDB-8rif:
Cryo-EM structure of the MCM double hexamer loaded onto dsDNA.
Method: single particle / : Miller TCR, Lim CT, Diffley JFX, Costa A

PDB-8rig:
Cryo-EM structure of an MCM helicase single hexamer loaded onto dsDNA.
Method: single particle / : Miller TCR, Lim CT, Diffley JFX, Costa A

EMDB-19675:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19676:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-45655:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

PDB-9ckv:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

EMDB-19576:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19582:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxh:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxx:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17216:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17229:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17236:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8ovj:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-15272:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT
Method: single particle / : Rajan KS, Yonath A, Bashan A

PDB-8a98:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT
Method: single particle / : Rajan KS, Yonath A, Bashan A

EMDB-13818:
Electron bifurcating hydrogenase - HydABC from A. woodii
Method: single particle / : Katsyv A, Kumar A, Saura P, Poeverlein MC, Freibert SA, Stripp S, Jain S, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

EMDB-15166:
Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Acetobacterium woodii in the reduced state
Method: single particle / : Kumar A, Saura P, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

PDB-7q4v:
Electron bifurcating hydrogenase - HydABC from A. woodii
Method: single particle / : Katsyv A, Kumar A, Saura P, Poeverlein MC, Freibert SA, Stripp S, Jain S, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

PDB-8a5e:
Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Acetobacterium woodii in the reduced state
Method: single particle / : Kumar A, Saura P, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

EMDB-13819:
CryoEM structure of electron bifurcating Fe-Fe hydrogenase HydABC complex A. woodii in the oxidised state
Method: single particle / : Kumar A, Saura P, Poeverlein MC, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

EMDB-15212:
Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Thermoanaerobacter kivui in the reduced state
Method: single particle / : Kumar A, Saura P, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

EMDB-16011:
Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Thermoanaerobacter kivui in the oxidised state
Method: single particle / : Kumar A, Schuller JM

PDB-7q4w:
CryoEM structure of electron bifurcating Fe-Fe hydrogenase HydABC complex A. woodii in the oxidised state
Method: single particle / : Kumar A, Saura P, Poeverlein MC, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

PDB-8a6t:
Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Thermoanaerobacter kivui in the reduced state
Method: single particle / : Kumar A, Saura P, Gamiz-Hernandez AP, Kaila VRI, Mueller V, Schuller JM

PDB-8bew:
Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Thermoanaerobacter kivui in the oxidised state
Method: single particle / : Kumar A, Schuller JM

EMDB-13739:
Tomogram of a TauRD-YFP aggregate in a TauRD-YFP expressing Hek293T cell
Method: electron tomography / : Guo Q, Saha I, Fernandez-Busnadiego R, Hartl FU

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more