[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 67 items for (author: sakamoto & m)

EMDB-42676:
5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)

EMDB-42999:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking

PDB-8uwl:
5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)

PDB-8v6u:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking

EMDB-15851:
Cryo-EM structure of cytochrome bd oxidase from C. glutamicum

PDB-8b4o:
Cryo-EM structure of cytochrome bd oxidase from C. glutamicum

EMDB-33707:
Apoferritin structure at 1.46 angstrom resolution by CryoARM300 equipped with Apollo

EMDB-14587:
Cryo-EM structure of the human GS-GN complex in the inhibited state

PDB-7zbn:
Cryo-EM structure of the human GS-GN complex in the inhibited state

EMDB-25791:
cryo-EM structure of MBP-KIX-apoferritin

EMDB-25799:
cryo-EM structure of MBP-KIX-apoferritin complex with peptide 7

PDB-7tb3:
cryo-EM structure of MBP-KIX-apoferritin

PDB-7tbh:
cryo-EM structure of MBP-KIX-apoferritin complex with peptide 7

EMDB-31472:
eIF2B-SFSV NSs

PDB-7f64:
eIF2B-SFSV NSs

EMDB-31474:
eIF2B-SFSV NSs-1-eIF2

EMDB-31475:
eIF2B-SFSV NSs-2-eIF2

EMDB-32023:
eIF2B-SFSV NSs C2-imposed

PDB-7f66:
eIF2B-SFSV NSs-1-eIF2

PDB-7f67:
eIF2B-SFSV NSs-2-eIF2

PDB-7vlk:
eIF2B-SFSV NSs C2-imposed

EMDB-12324:
In situ cryo-electron tomogram of the Synechocystis wild-type VIPP1 strain grown in high light

EMDB-12325:
In situ cryo-electron tomogram of the Synechocystis F4E VIPP1 mutant grown in high light

EMDB-12326:
In situ cryo-electron tomogram of the Synechocystis V11E VIPP1 mutant grown in high light

EMDB-12327:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast

EMDB-12328:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast

EMDB-12329:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast

EMDB-12330:
In situ cryo-electron tomogram of a cluster of VIPP1-mCherry structures inside the Chlamydomonas chloroplast

EMDB-12710:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

EMDB-12711:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

EMDB-12712:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

EMDB-12713:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

EMDB-12714:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

PDB-7o3w:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

PDB-7o3x:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

PDB-7o3y:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

PDB-7o3z:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

PDB-7o40:
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity

EMDB-11054:
Linear Ubiquitin Chain Assembly Complex

EMDB-30568:
eIF2B-eIF2(aP), aPg complex

EMDB-30569:
eIF2B-eIF2(aP), aP2 complex

EMDB-30570:
eIF2B-eIF2(aP), aP1 complex

EMDB-30571:
eIF2B apo

PDB-7d43:
eIF2B-eIF2(aP), aPg complex

PDB-7d44:
eIF2B-eIF2(aP), aP2 complex

PDB-7d45:
eIF2B-eIF2(aP), aP1 complex

PDB-7d46:
eIF2B apo

EMDB-4908:
Cryo-EM structure of the E. coli cytochrome bd-I oxidase at 2.68 A resolution

PDB-6rko:
Cryo-EM structure of the E. coli cytochrome bd-I oxidase at 2.68 A resolution

PDB-6k71:
eIF2 - eIF2B complex

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more