[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,071 items for (author: rence & c)

EMDB-72221:
AK01 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

EMDB-72222:
XZ440 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

PDB-9q50:
AK01 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

PDB-9q57:
XZ440 integrase inhibitor bound to Wild-type HIV-1 intasome
Method: single particle / : Jing T, Li M, Lyumkis D

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-72108:
Cryo-EM Structure of HIV-1 BG505DS-SOSIP.664 Env Trimer Bound to DFPH-a.01_10R59P_LC Fab
Method: single particle / : Pletnev S, Kwong P, Fischer E

PDB-9q0w:
Cryo-EM Structure of HIV-1 BG505DS-SOSIP.664 Env Trimer Bound to DFPH-a.01_10R59P_LC Fab
Method: single particle / : Pletnev S, Kwong P

EMDB-47728:
Structure of thioferritin (PfDPSL) with ferrihydrite growth at a single three-fold pore.
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

PDB-9e8s:
Structure of thioferritin (PfDPSL) with ferrihydrite growth at a single three-fold pore.
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

EMDB-71280:
HmuS heme dechelatase: disordered domain 1, heme free.
Method: single particle / : Gauvin CC, Nath AK, Rodrigues da Silva R, Akpoto E, Dubois JL, Lawrence CM

PDB-9p4s:
HmuS heme dechelatase: disordered domain 1, heme free.
Method: single particle / : Gauvin CC, Nath AK, Rodrigues da Silva R, Akpoto E, Dubois JL, Lawrence CM

EMDB-46758:
Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46759:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E.DS
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46760:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46761:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46762:
Cryo-EM structure of gB-Ecto.516P.531E.DS, a prefusion-stabilized HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46765:
Cryo-EM structure of gB-Ecto.516P, an HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Lawrence L, Kwong PD

PDB-9dd6:
Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9dd7:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E.DS
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9dd8:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9dd9:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9dda:
Cryo-EM structure of gB-Ecto.516P.531E.DS, a prefusion-stabilized HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9ddc:
Cryo-EM structure of gB-Ecto.516P, an HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Lawrence L, Kwong PD

EMDB-52019:
Structure of A16/G9 in complex with A56/K2 (vaccinia virus)
Method: single particle / : Vernuccio R, Meola A, Guardado-Calvo P

EMDB-53936:
Structure of A16/G9 in complex with A56/K2 at pH 5.5 (vaccinia virus)
Method: single particle / : Vernuccio R, Battini L, Meola A, Guardado-Calvo P

PDB-9hbk:
Structure of A16/G9 in complex with A56/K2 (vaccinia virus)
Method: single particle / : Vernuccio R, Meola A, Guardado-Calvo P

PDB-9rdh:
Structure of A16/G9 in complex with A56/K2 at pH 5.5 (vaccinia virus)
Method: single particle / : Vernuccio R, Battini L, Meola A, Guardado-Calvo P

EMDB-46483:
A widespread heme dechelatase in healthy and pathogenic human microbiomes.
Method: single particle / : Gauvin CC, Nath AK, Rodrigues da Silva R, Akpoto E, Dubois JL, Lawrence CM

PDB-9d26:
A widespread heme dechelatase in healthy and pathogenic human microbiomes.
Method: single particle / : Gauvin CC, Nath AK, Rodrigues da Silva R, Akpoto E, Dubois JL, Lawrence CM

EMDB-45873:
Post-targeting aCascade Type IA CRISPR-Cas Surveillance Complexes
Method: single particle / : Findlay JL, Gentry JK, Lawrence CM

EMDB-45875:
Post-targeting aCascade Type IA CRISPR-Cas Surveillance Complexes
Method: single particle / : Findlay JL, Gentry JK, Lawrence CM

PDB-9cro:
Post-targeting aCascade Type IA CRISPR-Cas Surveillance Complexes
Method: single particle / : Findlay JL, Gentry JK, Lawrence CM

PDB-9crq:
Post-targeting aCascade Type IA CRISPR-Cas Surveillance Complexes
Method: single particle / : Findlay JL, Gentry JK, Lawrence CM

EMDB-45874:
Post-targeting aCascade Type IA CRISPR-Cas Surveillance Complexes
Method: single particle / : Gentry JK, Findlay JL, Lawrence CM

PDB-9crp:
Post-targeting aCascade Type IA CRISPR-Cas Surveillance Complexes
Method: single particle / : Gentry JK, Findlay JL, Lawrence CM

EMDB-46055:
Structure of thioferritin from Pyrococcus furiosis
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

EMDB-46063:
Structure of thioferritin exhibiting iron mineral nucleation, from Pyrococcus furiosis
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

EMDB-46064:
Structure of thioferritin with averaged iron mineral core, from Pyrococcus furiosis
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

PDB-9cz0:
Structure of thioferritin from Pyrococcus furiosis
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

PDB-9cz8:
Structure of thioferritin exhibiting iron mineral nucleation, from Pyrococcus furiosis
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

PDB-9cz9:
Structure of thioferritin with averaged iron mineral core, from Pyrococcus furiosis
Method: single particle / : Gauvin CC, Waghwani HK, Tokmina-Lukaszewska M, Bothner B, Douglas T, Lawrence CM

EMDB-51295:
Recombinant Myeloperoxidase bound to nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51296:
Nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more