[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 276 items for (author: razi & a)

EMDB-55083:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-55091:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spf:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spi:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-48679:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 1A1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48680:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 1H2
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48681:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 6G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48682:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 7G4
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-54546:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 3IsdH(alpha2beta):Hbtet complex
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54563:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 4 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54565:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 0 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54566:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 0 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54567:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 4 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54585:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 3IsdH(alphabeta2):Hbtet complex
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54591:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha2):Hbtet complex - 3DVA component 0 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54613:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha2):Hbtet complex - 3DVA component 0 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54618:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 0 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54619:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 0 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54620:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 1 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54621:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 1 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

PDB-9s3p:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 3IsdH(alpha2beta):Hbtet complex
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

PDB-9s4f:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 4 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

PDB-9s4i:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 0 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

PDB-9s4j:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 0 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

PDB-9s4k:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 4 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-48510:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 20D10 and CR9114
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48511:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G1 and CR9114
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48512:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 6G1, 1A1 and CR9114
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48683:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 7G11
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48684:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12C11
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48685:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48686:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G8
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48687:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G9
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48688:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 13E8
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48689:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 17C12
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48690:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 17E3
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48692:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 20D10
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48693:
A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal fab 1A1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48694:
Negative stain map of A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal Fab 20D10
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48695:
Negative stain map of A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal Fab 6G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48696:
Negative stain map of A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal Fab 12G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48822:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fabs 1A1, 6G1, and CR9114.
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

PDB-9mq1:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 20D10
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

PDB-9mq2:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

PDB-9mq3:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 6G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-53223:
The structure of the DNA-binding domain of Nuclear Factor 1 X bound to NFI consensus DNA sequence
Method: helical / : Tiberi M, Nardini M, Chaves-Sanjuan A, Gourlay LJ, Bonnet DMV

PDB-9qky:
The structure of the DNA-binding domain of Nuclear Factor 1 X bound to NFI consensus DNA sequence
Method: helical / : Tiberi M, Nardini M, Chaves-Sanjuan A, Gourlay LJ, Bonnet DMV

EMDB-48118:
Map of Neuraminidase active site specific polycloncal antibody from sera of 10 mice vaccinated with Indiana 2011 Group 2 Neuraminidase
Method: single particle / : Ferguson JA, Han J, Rodriguez AJ, Torres JL, Ward AB

EMDB-48165:
Neuraminidase in complex with mAb 5-6
Method: single particle / : Ferguson JA, Raghavan SSR, Ward AB

EMDB-48166:
Neuraminidase in complex with mAb 5-12
Method: single particle / : Ferguson JA, Raghavan SSR, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more