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Showing 1 - 50 of 5,122 items for (author: qu & k)

EMDB-58600:
Cryo-EM map of the acetyl-CoA decarbonylase/synthase (ACDS) complex from Methanosarcina acetivorans
Method: single particle / : Zimmer E, Reif-Trauttmansdorff T, Schuller JM

EMDB-58601:
Cryo-EM structure of the CO dehydrogenase (CODH) subcomplex from Methanosarcina acetivorans
Method: single particle / : Zimmer E, Reif-Trauttmansdorff T, Schuller JM

PDB-31ox:
Cryo-EM structure of the CO dehydrogenase (CODH) subcomplex from Methanosarcina acetivorans
Method: single particle / : Zimmer E, Reif-Trauttmansdorff T, Schuller JM

EMDB-66217:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-66218:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-76279:
Moorella thermoacetica LarC (conformation 1)
Method: single particle / : Kim KH, Wolfe R

EMDB-76280:
Moorella thermoacetica LarC (conformation 2)
Method: single particle / : Kim KH, Wolfe R

EMDB-76281:
Moorella thermoacetica LarC (conformation 3)
Method: single particle / : Kim KH, Wolfe R

EMDB-76282:
Moorella thermoacetica LarC in complex with P2TAD
Method: single particle / : Kim KH, Wolfe R

EMDB-75979:
Cryo-EM structure of human exportin-1 conjugated with FR-027*
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-55847:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

PDB-9tey:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

EMDB-73877:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73882:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73883:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7q:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7v:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7x:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-72526:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

PDB-9y61:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

EMDB-54271:
Cryo-EM structure of the LB_DQB0303_A Fab - HLA-DQB1*03:03/DQA1*02:01 human alloantibody-HLA complex
Method: single particle / : Zampieri V, Priddey A, Linares R, Kosmoliaptsis V, Marquez JA

PDB-9rug:
Cryo-EM structure of the LB_DQB0303_A Fab - HLA-DQB1*03:03/DQA1*02:01 human alloantibody-HLA complex
Method: single particle / : Zampieri V, Priddey A, Linares R, Kosmoliaptsis V, Marquez JA

EMDB-62184:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

PDB-9k91:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

EMDB-54272:
Cryo-EM structure of the LB_DQB0602_B Fab - HLA-DQB1*06:02/DQA1*01:02 human alloantibody-HLA complex
Method: single particle / : Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA

PDB-9ruh:
Cryo-EM structure of the LB_DQB0602_B Fab - HLA-DQB1*06:02/DQA1*01:02 human alloantibody-HLA complex
Method: single particle / : Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA

EMDB-54270:
Cryo-EM structure of the LB_DQB0301_A Fab - HLA-DQB1*03:01/DQA1*05:02 human alloantibody-HLA complex
Method: single particle / : Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA

PDB-9ruf:
Cryo-EM structure of the LB_DQB0301_A Fab - HLA-DQB1*03:01/DQA1*05:02 human alloantibody-HLA complex
Method: single particle / : Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA

EMDB-54410:
Icosahedral reconstruction of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54411:
Chikungunya virus-like particle trimer 1
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54412:
Chikungunya virus-like particle trimer 2
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54413:
Composite density map of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-77057:
IST1 bound to PI(3,5)P2 containing membrane
Method: helical / : Moss III FR, Talledge N, Alian A, McCullough J, Frost A, Sundquist WI

EMDB-77058:
IST1 bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Moss III FR, Talledge N, McCullough J, Frost A, Sundquist WI

EMDB-77060:
CHMP1A bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Talledge N, Moss III FR, McCullough J, Frost A, Sundquist WI

PDB-13gh:
IST1 bound to PI(3,5)P2 containing membrane
Method: helical / : Moss III FR, Talledge N, Alian A, McCullough J, Frost A, Sundquist WI

PDB-13gj:
IST1 bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Moss III FR, Talledge N, McCullough J, Frost A, Sundquist WI

PDB-13gm:
CHMP1A bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Talledge N, Moss III FR, McCullough J, Frost A, Sundquist WI

EMDB-72520:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72521:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72522:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72523:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5r:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5s:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5t:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5u:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-53911:
Cryo-ET structure of N-terminally truncated membrane-bound EHD2 complex
Method: subtomogram averaging / : Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O

PDB-9rc1:
Cryo-ET structure of N-terminally truncated membrane-bound EHD2 complex
Method: subtomogram averaging / : Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O

EMDB-54064:
Structure of the O-oligosaccharyl transferase PglL from Neisseria meningitidis in complex with a nanobody
Method: single particle / : Harrison PJ, Naismith JH, Clare DK, Quigley A

PDB-9rmk:
Structure of the O-oligosaccharyl transferase PglL from Neisseria meningitidis in complex with a nanobody
Method: single particle / : Harrison PJ, Naismith JH, Clare DK, Quigley A

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