[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 63 items for (author: pyle & a)

EMDB-48538:
CryoEM Structure of the Candida albicans Group I Intron-GMP Complex

EMDB-48539:
CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Magnesium Condition

EMDB-48540:
CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Calcium Condition

PDB-9mqs:
CryoEM Structure of the Candida albicans Group I Intron-GMP Complex

PDB-9mqt:
CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Magnesium Condition

PDB-9mqu:
CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Calcium Condition

EMDB-47326:
Catalytic domain of Dihydrolipoamide Succinytransferase

PDB-9dz8:
Catalytic domain of Dihydrolipoamide Succinytransferase

EMDB-19879:
COPII coat on native membranes - 5-way vertex

EMDB-50672:
A 3.3A sub-tomogram average of HIV-1 CA-SP1 from 5 tomograms in EMPIAR-10164 obtained using RELION 5

EMDB-40348:
Cryo-EM structure of RIG-I in complex with p3SLR14

PDB-8sd0:
Cryo-EM structure of RIG-I in complex with p3SLR14

EMDB-40347:
Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30

PDB-8scz:
Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30

EMDB-19410:
COPII inner coat with Sed5 cargo bound

EMDB-19414:
COPII outer coat rod on tubules

EMDB-19416:
COPII outer coat vertex from coated tubules

EMDB-19417:
COPII inner coat on vesicles

EMDB-19418:
COPII outer coat vertex on vesicles

EMDB-19421:
COPII outer coat rods on vesicles

EMDB-40985:
Structure of a group II intron ribonucleoprotein in the pre-ligation (pre-2F) state

EMDB-40986:
Structure of a group II intron ribonucleoprotein in the pre-branching (pre-1F) state

EMDB-40987:
Structure of a group II intron ribonucleoprotein in the post-ligation (post-2F) state

PDB-8t2r:
Structure of a group II intron ribonucleoprotein in the pre-ligation (pre-2F) state

PDB-8t2s:
Structure of a group II intron ribonucleoprotein in the pre-branching (pre-1F) state

PDB-8t2t:
Structure of a group II intron ribonucleoprotein in the post-ligation (post-2F) state

EMDB-29823:
Cryo-EM structure of RNP end

EMDB-29824:
Cryo-EM structure of RNP end 2

EMDB-29825:
Cryo-EM structure of RNP inter

PDB-8g7t:
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-end)

PDB-8g7u:
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-semi-closed end)

PDB-8g7v:
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-inter)

PDB-8bsh:
COPII inner coat

EMDB-16183:
In situ structure of the Caulobacter crescentus S-layer

EMDB-16207:
HIV-1 CA-SP1 subtomogram average with Relion4 from EMPIAR-10164 dataset, 3.2 A from 5 tomograms

EMDB-16209:
HIV-1 CA-SP1 subtomogram average with Relion4 from EMPIAR-10164 dataset, 3.0 A from the full dataset

PDB-8bqe:
In situ structure of the Caulobacter crescentus S-layer

EMDB-26549:
CryoEM Structure of an Group II Intron Retroelement (apo-complex)

EMDB-26550:
CryoEM Structure of an Group II Intron Retroelement

PDB-7uim:
CryoEM Structure of an Group II Intron Retroelement (apo-complex)

PDB-7uin:
CryoEM Structure of an Group II Intron Retroelement

EMDB-27744:
Cryo-EM structure of RIG-I bound to the end of OHSLR30 (+ATP)

EMDB-27745:
Cryo-EM structure of RIG-I bound to the internal sites of OHSLR30 (+ATP)

PDB-8dvs:
Cryo-EM structure of RIG-I bound to the end of OHSLR30 (+ATP)

PDB-8dvu:
Cryo-EM structure of RIG-I bound to the internal sites of OHSLR30 (+ATP)

EMDB-26022:
Cryo-EM structure of RIG-I in complex with p3dsRNA

EMDB-26023:
Cryo-EM structure of RIG-I in complex with p2dsRNA

EMDB-26024:
Cryo-EM structure of RIG-I in complex with p1dsRNA

EMDB-26025:
Cryo-EM structure of RIG-I in complex with OHdsRNA

EMDB-26026:
Cryo-EM structure of RIG-I bound to the end of p3SLR30 (+ATP)

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more