[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 136 items for (author: pang & s)

EMDB-43712:
Human EBP complexed with compound 1
Method: single particle / : Sun D, Masureel M

EMDB-43713:
Human EBP complexed with compound 3a
Method: single particle / : Sun D, Masureel M

PDB-8w0r:
Human EBP complexed with compound 1
Method: single particle / : Sun D, Masureel M

PDB-8w0s:
Human EBP complexed with compound 3a
Method: single particle / : Sun D, Masureel M

EMDB-37640:
Cryo-EM structure of DiCas7-11 in complex with crRNA
Method: single particle / : Ma HY, Tang XD

EMDB-37649:
Cryo-EM structure of DiCas7-11-crRNA in complex with regulator
Method: single particle / : Ma HY, Tang XD

EMDB-37653:
Cryo-EM structure of DiCas7-11 mutant in complex with crRNA
Method: single particle / : Ma HY, Tang XD

EMDB-37655:
Cryo-EM structure of Cas7-11-crRNA bound to N-terminal of TPR-CHAT
Method: single particle / : Ma HY, Tang XD

PDB-8wm4:
Cryo-EM structure of DiCas7-11 in complex with crRNA
Method: single particle / : Ma HY, Tang XD

PDB-8wmc:
Cryo-EM structure of DiCas7-11-crRNA in complex with regulator
Method: single particle / : Ma HY, Tang XD

PDB-8wmi:
Cryo-EM structure of DiCas7-11 mutant in complex with crRNA
Method: single particle / : Ma HY, Tang XD

PDB-8wml:
Cryo-EM structure of Cas7-11-crRNA bound to N-terminal of TPR-CHAT
Method: single particle / : Ma HY, Tang XD

EMDB-36062:
Asfv topoisomerase 2 - apo conformer Ia
Method: single particle / : Chang CW, Tsai MD

EMDB-36063:
Asfv topoisomerase 2 - apo conformer Ib
Method: single particle / : Chang CW, Tsai MD

EMDB-36064:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Method: single particle / : Chang CW, Tsai MD

EMDB-36065:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Method: single particle / : Chang CW, Tsai MD

EMDB-36066:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Method: single particle / : Chang CW, Tsai MD

EMDB-36067:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Method: single particle / : Chang CW, Tsai MD

EMDB-36116:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Method: single particle / : Chang CW, Tsai MD

EMDB-36117:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Method: single particle / : Chang CW, Tsai MD

EMDB-36118:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Method: single particle / : Chang CW, Tsai MD

EMDB-36473:
Cryo-EM structure of the full-length African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide
Method: single particle / : Chang CW, Tsai MD

PDB-8j87:
Asfv topoisomerase 2 - apo conformer Ia
Method: single particle / : Chang CW, Tsai MD

PDB-8j88:
Asfv topoisomerase 2 - apo conformer Ib
Method: single particle / : Chang CW, Tsai MD

PDB-8j89:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Method: single particle / : Chang CW, Tsai MD

PDB-8j8a:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Method: single particle / : Chang CW, Tsai MD

PDB-8j8b:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Method: single particle / : Chang CW, Tsai MD

PDB-8j8c:
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Method: single particle / : Chang CW, Tsai MD

PDB-8j9v:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Method: single particle / : Chang CW, Tsai MD

PDB-8j9w:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Method: single particle / : Chang CW, Tsai MD

PDB-8j9x:
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Method: single particle / : Chang CW, Tsai MD

EMDB-33414:
Cryo-EM structure of Arf6 helical polymer assembled on lipid membrane
Method: helical / : Pang XY, Zhang Y, Sun F

PDB-7xrd:
Cryo-EM structure of Arf6 helical polymer assembled on lipid membrane
Method: helical / : Pang XY, Zhang Y, Sun F

EMDB-40050:
Cryo-electron microscopy structure of the zinc transporter from Bordetella bronchiseptica
Method: single particle / : Liu Q, Chai J, Pang CX, Shanklin J

PDB-8ght:
Cryo-electron microscopy structure of the zinc transporter from Bordetella bronchiseptica
Method: single particle / : Liu Q, Chai J, Pang CX, Shanklin J

EMDB-34648:
CryoEM structure of Helicobacter pylori UreFD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

EMDB-34659:
CryoEM Structure of Klebsiella pneumoniae UreD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

PDB-8hc1:
CryoEM structure of Helicobacter pylori UreFD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

PDB-8hcn:
CryoEM Structure of Klebsiella pneumoniae UreD/urease complex
Method: single particle / : Nim YS, Fong IYH, Deme J, Tsang KL, Caesar J, Johnson S, Wong KB, Lea SM

EMDB-26809:
KDM2A-nucleosome structure stabilized by H3K36C-UNC8015 covalent conjugate
Method: single particle / : Spangler CJ, Skrajna A, Foley CA, Budziszewski GR, Azzam DN, James LI, Frye SV, McGinty RK

EMDB-26810:
KDM2B-nucleosome complex stabilized by H3K36C-UNC8015 covalent conjugate
Method: single particle / : Spangler CJ, Skrajna A, Foley CA, Budziszewski GR, Azzam DN, James LI, Frye SV, McGinty RK

PDB-7uv9:
KDM2A-nucleosome structure stabilized by H3K36C-UNC8015 covalent conjugate
Method: single particle / : Spangler CJ, Skrajna A, Foley CA, Budziszewski GR, Azzam DN, James LI, Frye SV, McGinty RK

EMDB-25777:
Structure of VRK1 C-terminal tail bound to nucleosome core particle
Method: single particle / : Spangler CJ, Budziszewski GR

EMDB-25778:
Uncrosslinked VRK1-nucleosome complex
Method: single particle / : Spangler CJ, Budziszewski GR, McGinty RK

PDB-7tan:
Structure of VRK1 C-terminal tail bound to nucleosome core particle
Method: single particle / : Spangler CJ, Budziszewski GR, McGinty RK

EMDB-24473:
Structure of a BAM/EspP(beta9-12) hybrid-barrel intermediate
Method: single particle / : Wu RR, Noinaj N

EMDB-24474:
Structure of a BAM in MSP1E3D1 nanodiscs at 4 Angstrom resolution
Method: single particle / : Wu RR, Noinaj N

EMDB-24475:
Structure of BAM in MSP1E3D1 nanodiscs prepared from E. coli outer membranes
Method: single particle / : Wu RR, Noinaj N

EMDB-24476:
The structure of BAM in MSP1D1 nanodiscs
Method: single particle / : Wu RR, Noinaj N

EMDB-24477:
The structure of BAM in MSP2N2 nanodiscs
Method: single particle / : Wu RR, Noinaj N

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more