[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 480 items for (author: osamu & n)

EMDB-67107:
Cryo-EM structure of the human A2A adenosine receptor in complex with a Fab antibody fragment
Method: single particle / : Miyashita Y, Konno R, Ogasawara S, Okuda Y, Takamuku Y, Moriya T, Saito T, Murata T, Ohara O, Kawashima Y

PDB-9xqb:
Cryo-EM structure of the human A2A adenosine receptor in complex with a Fab antibody fragment
Method: single particle / : Miyashita Y, Konno R, Ogasawara S, Okuda Y, Takamuku Y, Moriya T, Saito T, Murata T, Ohara O, Kawashima Y

EMDB-62578:
Structure of EP67 bound to human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

EMDB-62580:
Structure of JR14a bound to human C3aR in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

EMDB-62586:
Structure of mouse TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62588:
Structure of human TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62598:
Structure of SB290157 bound to human C3aR in complex with Go (Full map)
Method: single particle / : Banerjee R, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Nureki O, Shukla AK

EMDB-62610:
Structure of mouse C5a bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62619:
Structure of mouse C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62624:
Structure of human C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62626:
Structure of EP67 bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62636:
Structure of beta-arrestin2 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62649:
Structure of beta-arrestin1 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62651:
Structure of EP67 bound human C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62654:
Structure of EP67 bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62665:
Structure of mouse C3a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62712:
Structure of JR14a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK, Gati C

EMDB-64276:
Structure of EP54 bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-64291:
Structure of C5a-pep bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK, Gati C

EMDB-64325:
Structure of EP54 bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK, Gati C

PDB-9kug:
Structure of EP67 bound to human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

PDB-9kut:
Structure of JR14a bound to human C3aR in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

PDB-9kv6:
Structure of mouse TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kv8:
Structure of human TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kvp:
Structure of SB290157 bound to human C3aR in complex with Go (Full map)
Method: single particle / : Banerjee R, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Nureki O, Shukla AK

PDB-9kwg:
Structure of mouse C5a bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kwx:
Structure of mouse C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kx6:
Structure of human C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kxs:
Structure of EP67 bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9ky2:
Structure of beta-arrestin2 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kyu:
Structure of beta-arrestin1 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kz2:
Structure of EP67 bound human C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kz8:
Structure of EP67 bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9kzk:
Structure of mouse C3a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9l0h:
Structure of JR14a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK

PDB-9umj:
Structure of EP54 bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

PDB-9umr:
Structure of C5a-pep bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK

PDB-9umx:
Structure of EP54 bound human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Ganguly M, Mishra S, Dalal A, Shukla AK

EMDB-64554:
human mitoribosome trapped by retapamulin
Method: single particle / : Ando Y, Nureki O, Itoh Y

EMDB-64899:
human mitoirbosome trapped by retapamulin, global map
Method: single particle / : Ando Y, Nureki O, Itoh Y

EMDB-64900:
human mitoirbosome trapped by retapamulin, focused map
Method: single particle / : Ando Y, Nureki O, Itoh Y

PDB-9uwh:
human mitoribosome trapped by retapamulin
Method: single particle / : Ando Y, Nureki O, Itoh Y

EMDB-60263:
Cryo-EM structure of R-eLACCO2 in the lactate-bound state
Method: single particle / : Kamijo Y, Kusakizako T, Nureki O, Campbell RE, Nasu Y

PDB-8zmz:
Cryo-EM structure of R-eLACCO2 in the lactate-bound state
Method: single particle / : Kamijo Y, Kusakizako T, Nureki O, Campbell RE, Nasu Y

EMDB-61327:
Structure of Engineered Coagulation Factor VIII with Enhanced Secretion and Coagulation Potential
Method: single particle / : Kio H, Osamu N, Tsukasa O

PDB-9jbv:
Structure of Engineered Coagulation Factor VIII with Enhanced Secretion and Coagulation Potential
Method: single particle / : Kio H, Osamu N, Tsukasa O

EMDB-63603:
Cryo-EM structure of Rc-o319 RBD/R. cornutus ACE2 complex
Method: single particle / : Matsumoto K, Shihoya W, Nureki O

EMDB-65045:
Cryo-EM Structure of Rc-o319 Ectodomain trimer
Method: single particle / : Matsumoto K, Shihoya W, Nureki O

PDB-9m3f:
Cryo-EM structure of Rc-o319 RBD/R. cornutus ACE2 complex
Method: single particle / : Matsumoto K, Shihoya W, Nureki O

PDB-9vg7:
Cryo-EM Structure of Rc-o319 Ectodomain trimer
Method: single particle / : Matsumoto K, Shihoya W, Nureki O

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more