[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,170 items for (author: old & w)

EMDB-45001:
Structure of Mnx H340A complex from Bacillus sp. PL-12
Method: single particle / : Novikova IV, Evans JE

PDB-9bxa:
Structure of Mnx H340A complex from Bacillus sp. PL-12
Method: single particle / : Novikova IV, Evans JE

EMDB-42118:
Toxoplasma gondii apical end with ICMAP1 conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-42119:
Toxoplasma gondii apical end with ICMAP2 conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-42120:
Toxoplasma gondii apical end with ICMAP3i conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-42121:
Toxoplasma gondii apical end with ICMAP3ii conditionally knocked down
Method: electron tomography / : Martinez M, Dos Santos Pacheco N, Chang YW, Soldati-Favre D

EMDB-42116:
HCN1 complex with propofol
Method: single particle / : Kim ED, Nimigean CM

EMDB-42117:
HCN1 nanodisc
Method: single particle / : Kim ED, Nimigean CM

EMDB-44425:
HCN1 M305L with propofol
Method: single particle / : Kim ED, Nimigean CM

EMDB-44426:
HCN1 M305L holo
Method: single particle / : Kim ED, Nimigean CM

EMDB-50229:
Cryo-tomogram of FIB-milled vegetatively growing yeast cell with mitochondria
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50230:
Cryo-tomogram of FIB-milled pre-meiotic yeast cell with mitochondria
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50231:
Cryo-tomogram of FIB-milled meiotic yeast cell containing mitochondria with filaments
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50232:
Cryo-tomogram of FIB-milled yeast spore with mitochondria
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50233:
Cryo-tomogram of FIB-milled meiotic yeast cell containing mitochondria with filament arrays
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50234:
Cryo-tomogram of purified meiotic yeast mitochondria with Ald4 filaments
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-18723:
Cryo-EM structure of the cross-exon pre-B complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18724:
Cryo-EM structure of the cross-exon pre-B+5'ss complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18725:
Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex(tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18726:
Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPgammaS complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18727:
Cryo-EM structure of the cross-exon pre-B+AMPPNP complex (tri-snRNP region)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-19395:
CryoEM structure of recombinant human Bri2 BRICHOS oligomers
Method: single particle / : Chen G, Johansson J, Hebert H

EMDB-19594:
cryo-EM structure of dimerized cross-exon pre-B complex
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-19595:
cryo-EM structure of dimerized cross-exon B-like complex
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-19596:
cryo-EM structure of dimerized cross-exon pre-B+5'ss+ATPyS complex
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-19597:
cryo-EM structure of dimerized cross-exon pre-B+5'ssLNG+ATPyS complex
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-19598:
cryo-EM structure of dimerized cross-exon pre-B+ATP complex
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-19847:
cryo-EM structure of pre-B+5'ss complex (incubated at 30 degree)
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-19848:
cryo-EM structure of cross-exon pre-B+5'ss+ATP complex
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-19868:
cryo-EM structure of dimerized pre-B+5'ss complex
Method: single particle / : Zhang Z, Kumar V, Stark H, Luehrmann R

EMDB-18416:
Cryo-EM structure of the monocin tail-tube, MttP.
Method: helical / : Nadejda S, Lichtenstein R, Schlussel S, Azulay G, Borovok I, Holdengraber V, Elad N, Wolf SG, Zalk R, Zarivach R, Frank GA, Herskovits AA

PDB-8qhs:
Cryo-EM structure of the monocin tail-tube, MttP.
Method: helical / : Nadejda S, Lichtenstein R, Schlussel S, Azulay G, Borovok I, Holdengraber V, Elad N, Wolf SG, Zalk R, Zarivach R, Frank GA, Herskovits AA

EMDB-17528:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17529:
CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17530:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17531:
SerRS bound to serine tRNA
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17532:
Serine tRNA from Trichoplusia ni
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7b:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7c:
CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7d:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-18542:
Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18544:
Cryo-EM Structure of Pre-B Complex (core part)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18545:
Cryo-EM Structure of Pre-B+AMPPNP Complex (core part)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18546:
Cryo-EM Structure of Pre-B+5'ssLNG Complex (core part)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18547:
Cryo-EM Structure of Pre-B+ATP Complex (core part)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18548:
Cryo-EM Structure of Pre-B-like Complex (core part)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18555:
Cryo-EM Structure of Pre-B+5'ss Complex (core part)
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18718:
Cryo-EM structure of the cross-exon pre-B complex
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18781:
Cryo-EM structure of the cross-exon B-like complex
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

EMDB-18786:
Cryo-EM structure of the cross-exon pre-B+AMPPNP complex
Method: single particle / : Zhang Z, Kumar V, Dybkov O, Will CL, Zhong J, Ludwig S, Urlaub H, Kastner B, Stark H, Luehrmann R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more