[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 13,715 items for (author: oh & s)

PDB-9uje:
Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Method: single particle / : He MZ

EMDB-61568:
human GM-CSF with Fabs from autoantibodies, F1 and BD.
Method: single particle / : Kishikawa J, Kato T, Kurosaki T, Inoue T

EMDB-61569:
human GM-CSF with Fabs from autoantibodies, F1 and C.
Method: single particle / : Kishikawa J, Kato T, Kurosaki T, Inoue T

EMDB-53132:
Rubisco subtomogram average from chloroplasts of two weeks old Physcomitrium patens protonemata cells.
Method: subtomogram averaging / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53134:
Cryo-electron tomograms of Arabidopsis thaliana embryos.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53136:
Cryo-electron tomograms of Limonium bicolor salt gland.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53142:
Cryo-electron tomograms of Physcomitrium patens phyllids.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53531:
Cryo-EM structure of the complex CDK16:CCNY:14-3-3
Method: single particle / : Kosek D, Kohoutova K, Obsilova V, Obsil T

EMDB-53533:
Cryo-EM structure of the complex CCNY:14-3-3
Method: single particle / : Kosek D, Kohoutova K, Obsilova V, Obsil T

PDB-9r2i:
Cryo-EM structure of the complex CDK16:CCNY:14-3-3
Method: single particle / : Kosek D, Kohoutova K, Obsilova V, Obsil T

PDB-9r2n:
Cryo-EM structure of the complex CCNY:14-3-3
Method: single particle / : Kosek D, Kohoutova K, Obsilova V, Obsil T

EMDB-53095:
Cryo-EM structure of apo form of Arthrobacter psychrolactophilus L-arabinose isomerase
Method: single particle / : Laksmi FA, Jayawardena N, Nugraha Y, Raschdorf O, Herliana L, Hidayat I, Kohga H, Fey CM

EMDB-55141:
Human DNA polymerase epsilon bound to DNA blunt end
Method: single particle / : Roske JJ, Yeeles JTP

EMDB-55724:
Cryo-EM structure of Pol epsilon-PCNA reconstituted on a DNA scaffold with 5'-overhangs on either side of the double-stranded segment
Method: single particle / : Roske JJ, Yeeles JTP

PDB-9sri:
Human DNA polymerase epsilon bound to DNA blunt end
Method: single particle / : Roske JJ, Yeeles JTP

EMDB-55030:
Reduced bovine complex I in lipid nanodisc, NADH-active-Q10
Method: single particle / : Chung I, Hirst J

EMDB-55031:
Reduced bovine complex I in lipid nanodisc, NADH-active-altQ10
Method: single particle / : Chung I, Hirst J

EMDB-55032:
Reduced bovine complex I in lipid nanodisc, NADH-active-DDM
Method: single particle / : Chung I, Hirst J

EMDB-55033:
Reduced bovine complex I in lipid nanodisc, NADH-deactive
Method: single particle / : Chung I, Hirst J

EMDB-55034:
Reduced bovine complex I in lipid nanodisc, NADH-slack
Method: single particle / : Chung I, Hirst J

PDB-9smf:
Reduced bovine complex I in lipid nanodisc, NADH-active-Q10
Method: single particle / : Chung I, Hirst J

PDB-9smg:
Reduced bovine complex I in lipid nanodisc, NADH-active-altQ10
Method: single particle / : Chung I, Hirst J

PDB-9smh:
Reduced bovine complex I in lipid nanodisc, NADH-active-DDM
Method: single particle / : Chung I, Hirst J

PDB-9smi:
Reduced bovine complex I in lipid nanodisc, NADH-deactive
Method: single particle / : Chung I, Hirst J

EMDB-70517:
Anthoceros agrestis Rubisco (8 RbcL and 8 RbcS1) head to head stacking.
Method: single particle / : Ang WSL, Oh ZG, Li FW, Gunn LH

EMDB-70520:
A. agrestis Rubisco (8 RbcL 7 RbcS 1 RbcS-STAR)
Method: single particle / : Ang WSL, Oh ZG, Li FW, Gunn LH

EMDB-64577:
local ATPase-NCP density map of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

PDB-9ux9:
local ATPase-NCP structure of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

EMDB-53563:
Non-uniform refine map MiDAC complex
Method: single particle / : Fairall L, Schwabe JWR

EMDB-53564:
Focussed map (top) MiDAC complex
Method: single particle / : Fairall L, Schwabe JWR

EMDB-53565:
Focussed map (bottom) MiDAC complex
Method: single particle / : Fairall L, Schwabe JWR

EMDB-53566:
Focussed map (middle) MiDAC complex
Method: single particle / : Fairall L, Schwabe JWR

EMDB-54029:
13S proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

EMDB-54032:
13S+Beta1 proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

EMDB-54045:
dimerised 13S-13S+Beta5 proteasome precursor complexes
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

EMDB-54046:
15S proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

EMDB-54047:
13S+Beta5+Beta6 proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

EMDB-54048:
13S+Beta1+Beta5 proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

PDB-9rl3:
13S proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

PDB-9rla:
13S+Beta1 proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

PDB-9rlt:
dimerised 13S-13S+Beta5 proteasome precursor complexes
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

PDB-9rlz:
15S proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

PDB-9rm0:
13S+Beta5+Beta6 proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

PDB-9rm1:
13S+Beta1+Beta5 proteasome precursor complex
Method: single particle / : Mark E, Ramos PC, Nunes MM, Dohmen RJ, Wendler P

EMDB-72665:
Homomeric Glycine Receptor alpha2 with 1 mM Glycine in a Desensitized State
Method: single particle / : Klemm E, Gibbs E, Chakrapani S

EMDB-72668:
Homomeric Glycine Receptor alpha2 with 1 mM Glycine in an Open State
Method: single particle / : Klemm E, Gibbs E, Chakrapani S

EMDB-72674:
Homomeric Glycine Receptor alpha2 with 0.1 mM Glycine in an Open State
Method: single particle / : Klemm E, Gibbs E, Chakrapani S

EMDB-72675:
Homomeric Glycine Receptor alpha2 with 0.1 mM Glycine in a Desensitized State
Method: single particle / : Klemm E, Gibbs E, Chakrapani S

EMDB-72676:
Homomeric Glycine Receptor alpha2 with PTX in a Desensitized State
Method: single particle / : Klemm E, Gibbs E, Chakrapani S

EMDB-72683:
Homomeric Glycine Receptor alpha2 with 0.1 mM Glycine in an Apo State
Method: single particle / : Klemm E, Gibbs E, Chakrapani S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more