[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 288 items for (author: nelson & c)

EMDB-49059:
L9-targeting immunogen bound to three copies of L9 Fab
Method: single particle / : Garfinkle SE, Lin ZJ, Pallesen J

PDB-9n6e:
L9-targeting immunogen bound to three copies of L9 Fab
Method: single particle / : Garfinkle SE, Lin ZJ, Pallesen J

PDB-9p6r:
Structure of lysozyme-N,N',N"-triacetylchitotriose complex determined using REyes for automated MicroED
Method: electron crystallography / : Eremin D, Vlahakis NW, Rodriguez JA, Nelson HM

EMDB-48548:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48549:
SARS-CoV-2 S2 monomer in complex with NICA01B-1113 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48550:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr1:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr2:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-52762:
Structure of Far-Red Photosystem I from C. thermalis PCC 7203
Method: single particle / : Consoli G, Tufaill F, Murray JW, Fantuzzi A, Rutherford AW

PDB-9i9l:
Structure of Far-Red Photosystem I from C. thermalis PCC 7203
Method: single particle / : Consoli G, Tufaill F, Murray JW, Fantuzzi A, Rutherford AW

EMDB-49739:
The AAVpo.6 capsid
Method: single particle / : Nelson A, Mietzsch M, McKenna R

PDB-9nrp:
The AAVpo.6 capsid
Method: single particle / : Nelson A, Mietzsch M, McKenna R

EMDB-47928:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with human neutralizing antibody WRAIR-2008 (focused refinement of NTD and WRAIR-2008)
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

EMDB-48284:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with neutralizing human antibody WRAIR-2008
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

PDB-9ecz:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with human neutralizing antibody WRAIR-2008 (focused refinement of NTD and WRAIR-2008)
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

PDB-9mi3:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with neutralizing human antibody WRAIR-2008
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

EMDB-49827:
Complex of BREX proteins BrxB and PglZ from Salmonella typhimurium
Method: single particle / : Doyle LA, Stoddard B, Blower TR, Kaiser B

PDB-9nv3:
Hybrid model of a complex of BREX proteins BrxB and PglZ from Salmonella typhimurium
Method: single particle / : Doyle LA, Stoddard B, Blower TR, Kaiser B

PDB-9org:
MicroED structure of apo-form CTX-M-14 beta-lactamase
Method: electron crystallography / : Vlahakis N, Rodriguez JA, Jacobs LMC, Chen Y

PDB-9orh:
MicroED structure of the CTX-M-14 beta-lactamase-avibactam complex from inhibitor cocktail-soaked crystals
Method: electron crystallography / : Vlahakis N, Rodriguez JA, Jacobs LMC, Chen Y

PDB-9orl:
MicroED structure of CTX-M-14 beta-lactamase soaked with avibactam
Method: electron crystallography / : Vlahakis NW, Rodriguez JA, Jacobs LMC, Chen Y

PDB-9ors:
MicroED structure of CTX-M-14 beta-lactamase co-crystallized with avibactam
Method: electron crystallography / : Vlahakis NW, Rodriguez JA, Jacobs LMC, Chen Y

PDB-9orz:
MicroED structure of apo-form lysozyme
Method: electron crystallography / : Vlahakis NW, Flowers CW, Rodriguez JA

PDB-9os0:
MicroED structure of lysozyme complexed with N,N',N"-triacetylchitotriose from cocktail-soaked crystals
Method: electron crystallography / : Vlahakis NW, Flowers CW, Rodriguez JA

PDB-9os1:
MicroED structure of lysozyme co-crystallized with N,N',N"-triacetylchitotriose
Method: electron crystallography / : Vlahakis NW, Flowers CW, Rodriguez JA

PDB-9os8:
MicroED structure of lysozyme soaked with N,N',N"-triacetylchitotriose
Method: electron crystallography / : Vlahakis NW, Flowers CW, Rodriguez JA

PDB-9cq0:
Event-based electron counting microED structure of thiostrepton from a single crystal
Method: electron crystallography / : Vlahakis NW, Qu S, Richards LS, deMoraes LS, Nelson HM, Rodriguez JA

EMDB-49521:
HIV-1 Reverse Transcriptase with New Non-Nucleoside Reverse Transcriptase Inhibitor 12126065
Method: single particle / : Young MA, Lane TR, Raman R, Nelson JAE, Riabova O, Kazakova E, Monakhova N, Tsedilin A, Rees SD, Quinnell D, Chang G, Ekins S

PDB-9nlp:
HIV-1 Reverse Transcriptase with New Non-Nucleoside Reverse Transcriptase Inhibitor 12126065
Method: single particle / : Young MA, Lane TR, Raman R, Nelson JAE, Riabova O, Kazakova E, Monakhova N, Tsedilin A, Rees SD, Quinnell D, Chang G, Ekins S

EMDB-50063:
Structure of Far-Red Photosystem I from C. thermalis PCC 7203
Method: single particle / : Consoli G, Tufaill F, Murray JW, Fantuzzi A, Rutherford AW

PDB-9eys:
Structure of Far-Red Photosystem I from C. thermalis PCC 7203
Method: single particle / : Consoli G, Tufaill F, Murray JW, Fantuzzi A, Rutherford AW

EMDB-49042:
The capsid structure of AAVpo.1
Method: single particle / : Nelson A, Mietzsch M, McKenna R

PDB-9n5x:
The capsid structure of AAVpo.1
Method: single particle / : Nelson A, Mietzsch M, McKenna R

EMDB-44272:
Fab1-2 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44273:
Fab1-3 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44274:
Fab1-4 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44275:
Fab1-5 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44276:
Fab1-6 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44277:
Fab1-7 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44314:
Fab2-1 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44315:
Fab2-2 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44316:
Fab2-3 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44317:
Fab2-4 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44318:
Fab2-5 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44319:
Fab2-6 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44320:
Fab2-7 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

PDB-9b6o:
Fab1-2 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

PDB-9b6p:
Fab1-3 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

PDB-9b6q:
Fab1-4 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

PDB-9b6r:
Fab1-5 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more