[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 261 items for (author: mukherjee & r)

EMDB-49293:
cryoEM structure of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49294:
cryoEM structure of the A-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49295:
cryoEM structure of the B-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49296:
cryoEM structure of the human OGA-L Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49297:
cryoEM structure of the human OGA-L Catalytic Dimer, extra A-chain density
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne2:
cryoEM structure of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne4:
cryoEM structure of the A-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne5:
cryoEM structure of the B-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-55390:
In situ cryo-electron tomogram of a mouse rod photoreceptor cell containing the centriolar luminal distal ring
Method: electron tomography / : Mukherjee S, Daraspe J, Genoud C, Hamel V, Guichard P

EMDB-55391:
In situ cryo-electron tomogram of a mouse rod photoreceptor cell containing the centriolar luminal distal ring
Method: electron tomography / : Mukherjee S, Daraspe J, Genoud C, Hamel V, Guichard P

EMDB-52656:
Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon
Method: single particle / : Yang TJ, McDowell MA

EMDB-52829:
Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon complex with improved density for TRAP alpha luminal domain
Method: single particle / : Yang TJ, McDowell MA

PDB-9i78:
Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon
Method: single particle / : Yang TJ, McDowell MA

EMDB-53489:
Cryo-EM structure of human MATE1 in complex with cimetidine
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-53506:
Cryo-EM structure of human MATE1 in complex with MPP
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-53507:
Cryo-EM structure of human MATE1 in complex with metformin
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-53508:
Cryo-EM structure of human MATE1
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r10:
Cryo-EM structure of human MATE1 in complex with cimetidine
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r1e:
Cryo-EM structure of human MATE1 in complex with MPP
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r1f:
Cryo-EM structure of human MATE1 in complex with metformin
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r1g:
Cryo-EM structure of human MATE1
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-55393:
Subtomogram average of the hook density between microtubule doublets/triplets
Method: subtomogram averaging / : McCafferty C, van den Hoek HG, Righetto RD, Van der Stappen P, Mueller A, Stearns T, Engel BD

EMDB-55394:
Subtomogram average of the luminal distal ring from MTEC centrioles
Method: subtomogram averaging / : McCafferty C, van den Hoek HG, Righetto RD, Mueller A, Van der Stappen P, Stearns T, Engel BD

EMDB-61605:
50S Ribosomal Subunit precursor state III
Method: single particle / : Sengupta S, Mukherjee R, Pilsl M, Bagale S, Adhikary AD, Borkar A, Pradeepkumar PI, Engel C, Chowdhury A, Kaushal PS, Anand R

EMDB-61613:
50S subunit precursor state I
Method: single particle / : Sengupta S, Mukherjee R, Pilsl M, Bagale S, Adhikary AD, Borkar A, Pradeepkumar PI, Engel C, Chowdhury A, Kaushal PS, Anand R

EMDB-61625:
50S precursor - Erm complex (C-II)
Method: single particle / : Sengupta S, Mukherjee R, Pilsl M, Bagale S, Adhikary AD, Borkar A, Pradeepkumar PI, Engel C, Chowdhury A, Kaushal PS, Anand R

EMDB-61781:
50S precursor - Erm complex (C-I)
Method: single particle / : Sengupta S, Mukherjee R, Pilsl M, Bagale S, Adhikary AD, Borkar A, Pradeepkumar PI, Engel C, Chowdhury A, Kaushal PS, Anand R

PDB-9jmk:
50S Ribosomal Subunit precursor state III
Method: single particle / : Sengupta S, Mukherjee R, Pilsl M, Bagale S, Adhikary AD, Borkar A, Pradeepkumar PI, Engel C, Chowdhury A, Kaushal PS, Anand R

PDB-9jns:
50S precursor - Erm complex (C-II)
Method: single particle / : Sengupta S, Mukherjee R, Pilsl M, Bagale S, Adhikary AD, Borkar A, Pradeepkumar PI, Engel C, Chowdhury A, Kaushal PS, Anand R

PDB-9jsr:
50S precursor - Erm complex (C-I)
Method: single particle / : Sengupta S, Mukherjee R, Pilsl M, Bagale S, Adhikary AD, Borkar A, Pradeepkumar PI, Engel C, Chowdhury A, Kaushal PS, Anand R

EMDB-55386:
Tomogram of a mouse tracheal epithelial cell containing the C2CD3 luminal ring protein
Method: electron tomography / : van den Hoek HG, McCafferty C, Righetto RD, Stearns T, Engel BD

EMDB-49269:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X

EMDB-49276:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

EMDB-49277:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

EMDB-49290:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

EMDB-49291:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

EMDB-49304:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X

EMDB-49306:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

EMDB-49326:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X, Baker D, Jensen G

PDB-9nda:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X

PDB-9ndq:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

PDB-9ndt:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA and ATP-gamma-S
Method: single particle / : Yao Q, Yu X

PDB-9ndz:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9ne0:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9neb:
The rigid portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9nee:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir
Method: single particle / : Yao Q, Yu X

PDB-9nel:
The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with amenamevir
Method: single particle / : Yao Q, Yu X

EMDB-48617:
SaPI1 neck structure with DNA, tail completion protein, and tape measure protein
Method: single particle / : Kizziah JL, Dokland T

PDB-9mu2:
SaPI1 neck structure with DNA, tail completion protein, and tape measure protein
Method: single particle / : Kizziah JL, Dokland T

EMDB-45803:
Structural basis of BAK sequestration by MCL-1 and consequences for apoptosis initiation
Method: single particle / : Uchikawa E, Myasnikov A, Dey R, Moldoveanu T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more