[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 66 items for (author: morris & rk)

EMDB-53655:
Human Adenovirus D 10 Fiber Shaft by Focussed Refinement
Method: single particle / : Waraich K, Mundy RM, Bates EA, da Fonseca P, Morris E, Rizkallah PJ, Baker AT, T Young M, Parker AL, Bhella D

EMDB-53736:
Human Adenovirus D 10 Capsid Structure
Method: single particle / : Waraich K, Mundy RM, Bates EA, da Fonseca P, Morris E, Rizkallah PJ, Baker AT, Young MT, Parker AL, Bhella D

PDB-9r78:
Human Adenovirus D 10 Capsid Structure
Method: single particle / : Waraich K, Mundy RM, Bates EA, da Fonseca P, Morris E, Rizkallah PJ, Baker AT, Young MT, Parker AL, Bhella D

EMDB-71090:
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (nanodisc-subtracted)
Method: single particle / : Photenhauer AL, Sedzro JC, Ohi MD, Morrissey JH

EMDB-71093:
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab
Method: single particle / : Photenhauer AL, Sedzro JC, Morrissey JH, Ohi MD

EMDB-71094:
Nanodisc-embedded human TF/FVIIa/XK1
Method: single particle / : Photenhauer AL, Sedzro JC, Ohi MD, Morrissey JH

EMDB-71095:
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (3D Flexible Refinement)
Method: single particle / : Photenhauer AL, Sedzro JC, Morrissey JH, Ohi MD

PDB-9p0x:
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (nanodisc-subtracted)
Method: single particle / : Photenhauer AL, Sedzro JC, Ohi MD, Morrissey JH

EMDB-47000:
Rhesus RHA10.01 Fab in complex with HIV-1 Env BG505 DS-SOSIP trimer
Method: single particle / : Gorman J, Kwong PD

PDB-9dmb:
Rhesus RHA10.01 Fab in complex with HIV-1 Env BG505 DS-SOSIP trimer
Method: single particle / : Gorman J, Kwong PD

EMDB-49656:
Rabbit RB142 polyclonal Fab in complex with HIV-1 1086C NFL Env trimer
Method: single particle / : Lin RN, Torres JL, Ozorowski G, Ward AB

EMDB-47882:
Peptide 1 (GLP-1 (Aib16, ACPC18)) bound to GLP-1R/Gs complex
Method: single particle / : Cary BP, Hager MV, Mariam Z, Morris RK, Belousoff MJ, Deganutti G, Wootten D, Sexton PM, Gellman SH

EMDB-47883:
Peptide 2 (GLP-1 (ACPC18)) bound to GLP-1R/Gs complex (conformer 1)
Method: single particle / : Cary BP, Hager MV, Mariam Z, Morris RK, Belousoff MJ, Deganutti G, Wootten D, Sexton PM, Gellman SH

EMDB-47884:
Peptide 2 (GLP-1 (ACPC18)) bound to GLP-1R/Gs complex (conformer 2)
Method: single particle / : Cary BP, Hager MV, Mariam Z, Morris RK, Belousoff MJ, Deganutti G, Wootten D, Sexton PM, Gellman SH

EMDB-41346:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41359:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41360:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41361:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41362:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tkc:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl2:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl3:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl4:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl5:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41426:
Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

EMDB-41438:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

EMDB-41440:
Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

EMDB-41459:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide
Method: single particle / : Zhou T, Morano NC, Roark RS, Kwong PD, Xu J

PDB-8tnu:
Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

PDB-8to7:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

PDB-8to9:
Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

PDB-8top:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide
Method: single particle / : Zhou T, Morano NC, Roark RS, Kwong PD

EMDB-41309:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Morano NC, Hoyt F, Hansen B, Fischer E, Shapiro L

EMDB-41310:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
Method: single particle / : Morano NC, Becker JE, Shapiro L, Ho DD

PDB-8tjr:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-a.01 FAB
Method: single particle / : Morano NC, Hoyt F, Hansen B, Fischer E, Shapiro L

PDB-8tjs:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
Method: single particle / : Morano NC, Becker JE, Shapiro L

EMDB-25448:
Negative-stain EM reconstruction of SpFN_1B-06-PL, a SARS-CoV-2 spike fused to H.pylori ferritin nanoparticle vaccine candidate
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25449:
RFN_131, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Receptor-Binding Domain
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25450:
pCoV146, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike Receptor-Binding and N-Terminal Domains
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25451:
pCoV111, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike S1 Subunit
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-21424:
Helical reconstruction of HIV capsid protein
Method: helical / : Zhao H, Iqbal N, Vanblerkom P, Asturias F, Kvaratskhelia M

EMDB-21423:
Hexamer of Helical HIV capsid by RASTR method
Method: helical / : Zhao H, Iqbal N

PDB-6vws:
Hexamer of Helical HIV capsid by RASTR method
Method: helical / : Zhao H, Iqbal N, Asturias F, Kvaratskhelia M, Vanblerkom P

EMDB-21458:
Cryo-EM structure of Plasmodium vivax hexokinase (Open state)
Method: single particle / : Srivastava SS, Darling JE

EMDB-21459:
Cryo-EM structure of Plasmodium vivax hexokinase (Closed state)
Method: single particle / : Srivastava SS, Darling JE

PDB-6vyf:
Cryo-EM structure of Plasmodium vivax hexokinase (Open state)
Method: single particle / : Srivastava SS, Darling JE, Suryadi J, Morris JC, Drew ME, Subramaniam S

PDB-6vyg:
Cryo-EM structure of Plasmodium vivax hexokinase (Closed state)
Method: single particle / : Srivastava SS, Darling JE, Suryadi J, Morris JC, Drew ME, Subramaniam S

EMDB-21383:
Cryo-EM Structure of CAP256-VRC26.25 Fab bound to HIV-1 Env trimer CAP256.wk34.c80 SOSIP.RnS2
Method: single particle / : Gorman J, Kwong PD

PDB-6vtt:
Cryo-EM Structure of CAP256-VRC26.25 Fab bound to HIV-1 Env trimer CAP256.wk34.c80 SOSIP.RnS2
Method: single particle / : Gorman J, Kwong PD

EMDB-21372:
Cryo-EM structure of stabilized HIV-1 Env trimer CAP256.wk34.c80 SOSIP.RnS2
Method: single particle / : Gorman J, Kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more