[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 290 items for (author: marcel & v)

EMDB-70500:
Cryo-EM structure of bovine phosphodiesterase 6 bound to CB-5083
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

EMDB-70501:
Cryo-EM structure of human p97/VCP bound to inhibitor GND-135
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

PDB-9ohm:
Cryo-EM structure of bovine phosphodiesterase 6 bound to CB-5083
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

PDB-9ohn:
Cryo-EM structure of human p97/VCP bound to inhibitor GND-135
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

EMDB-53473:
Mouse Ribosome Classical Pre translocation state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

PDB-9qzp:
Mouse Ribosome Classical Pre translocation state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

EMDB-53427:
Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

PDB-9qwt:
Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

EMDB-53307:
Mouse RPS15 P131 Mutant Ribosome POST translocation state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

EMDB-53310:
Mouse Ribosome rotated-2 PRE state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

EMDB-53333:
Mouse Ribosome rotated-1 PRE state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

PDB-9qql:
Mouse RPS15 P131 Mutant Ribosome POST translocation state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

PDB-9qqp:
Mouse Ribosome rotated-2 PRE state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

PDB-9qsa:
Mouse Ribosome rotated-1 PRE state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

EMDB-53262:
Mouse Ribosome POST translocation state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

PDB-9qoh:
Mouse Ribosome POST translocation state
Method: single particle / : Santo PE, Astier A, Plisson-Chastang C

EMDB-54650:
Unliganded dimer - bacterial
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

EMDB-54651:
Unliganded tetramer of Glycogen phosphorylase from E. coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

EMDB-54658:
Complexed dimer - bacterial
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

EMDB-54663:
Complexed tetramer - bacterial
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s7v:
Structure of glycogen phosphorylase - dimeric form - from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s86:
Structure of glycogen phosphorylase - tetrameric form - from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s8b:
Structure of glycogen phosphorylase - dimeric form - in complex with HPr from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s8k:
Structure of glycogen phosphorylase - tetrameric form - in complex with HPr from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

EMDB-57163:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens gametophore leaflet tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57164:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens protonema tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57165:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens gametophore leaflet tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57166:
Cryo-ET of a plasmodesma in GHL17 Physcomitrium patens protonema tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57167:
Cryo-ET of a plasmodesma in GHL17 Physcomitrium patens protonema tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57168:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens protonema tissue treated with abscisic acid
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57169:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens protonema tissue treated with abscisic acid
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-56237:
Cryo-EM structure of the extracellular domain of DC-SIGN
Method: single particle / : Balke A, Scheerer P

EMDB-48285:
Human PARP1 N-terminal domains bound to nicked DNA
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-9mi8:
Human PARP1 N-terminal domains bound to nicked DNA
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-48313:
PARP1 ART in complex with HPF1 and EB47
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-9mja:
PARP1 ART in complex with HPF1 and EB47
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-55761:
Cryo-EM map of mouse heavy chain apoferritin
Method: single particle / : Haubner M, Williams HM, Hruby J, Guskov A, Kovalev K, Drabbels M, Lorenz UJ, Straub MS

EMDB-55765:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

EMDB-55766:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the K2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

EMDB-55769:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the O2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

PDB-9tbd:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

PDB-9tbe:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the K2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

PDB-9tbf:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the O2 state
Method: single particle / : Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

EMDB-54058:
1.7 A structure of conventional mouse heavy chain Apoferritin
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54082:
1.8 A structure of SiO2-sealed and revitrified (210 us) mouse heavy chain Apoferritin
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54136:
2.5 A structure of the E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54137:
2.4 A structure of the SiO2-sealed and revitrified (30 us) E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54138:
2.3 A structure of the SiO2-sealed and revitrified (150 us) E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54168:
2.7 A structure of the SiO2-sealed and revitrified (300 us) E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-67283:
C1 Symmetry of DNA tesseract
Method: single particle / : Shiu SCC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more