[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 84 items for (author: loeff & l)

EMDB-45897:
HsSTING with SR-717 and C53
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

EMDB-45898:
HsSTING with diABZI and C53, curved conformation
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

EMDB-45899:
HsSTING with diABZI and C53, together conformation
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

EMDB-45900:
HsSTING with diABZI and C53, apart conformation
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

PDB-9ct3:
HsSTING with SR-717 and C53
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

PDB-9ct4:
HsSTING with diABZI and C53, curved conformation
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

PDB-9ct5:
HsSTING with diABZI and C53, together conformation
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

PDB-9ct6:
HsSTING with diABZI and C53, apart conformation
Method: single particle / : Gharpure A, Sulpizio A, Lairson LL, Ward AB

EMDB-17844:
Escherichia coli SduA complex
Method: single particle / : Loeff L, Jinek M, Asanovic I, Boneberg F, Pfleiderer MM, Ferdigg A, Ackle F, Martinez J

EMDB-17845:
Escherichia coli SduA complex bound to DNA
Method: single particle / : Loeff L, Jinek M, Asanovic I, Boneberg F, Pfleiderer MM, Ferdigg A, Ackle F, Martinez J

PDB-8ps4:
Escherichia coli SduA complex
Method: single particle / : Loeff L, Jinek M

PDB-8ps5:
Escherichia coli SduA complex bound to DNA
Method: single particle / : Loeff L, Jinek M

EMDB-17127:
Cryo-EM structure of human tRNA ligase RTCB in complex with human PYROXD1.
Method: single particle / : Loeff L, Kroupova A, Asanovic I, Boneberg F, Pfleiderer MM, Ferdigg A, Ackle F, Martinez J, Jinek M

PDB-8orj:
Cryo-EM structure of human tRNA ligase RTCB in complex with human PYROXD1.
Method: single particle / : Loeff L, Kroupova A, Asanovic I, Boneberg F, Pfleiderer MM, Ferdigg A, Ackle F, Martinez J, Jinek M

EMDB-43148:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43149:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43150:
Human monoclonal antibody C7 targeting HB3VAR03 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-44539:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdf:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdg:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

PDB-9bhb:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

EMDB-50091:
Vibrio cholerae DdmD-DdmE holo complex
Method: single particle / : Loeff L, Jinek M

PDB-9ezy:
Vibrio cholerae DdmD-DdmE holo complex
Method: single particle / : Loeff L, Jinek M

EMDB-50090:
Vibrio cholerae DdmD apo complex
Method: single particle / : Loeff L, Jinek M

PDB-9ezx:
Vibrio cholerae DdmD apo complex
Method: single particle / : Loeff L, Jinek M

EMDB-18539:
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18812:
The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA - Focused refinement of the of the 60S subunit
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18813:
The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA - Focused refinement of the of the 40S subunit body
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18814:
The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA - Focused refinement of the of the 40S subunit head
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18815:
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA - Global human 80S ribosome refinement before focused refinements.
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

PDB-8qoi:
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-14493:
SpCas9 bound to 6 nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

EMDB-14494:
SpCas9 bound to 8-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

EMDB-14496:
SpCas9 bound to 12-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

EMDB-14497:
SpCas9 bound to 14-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

EMDB-14498:
SpCas9 bound to 16-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

EMDB-14499:
SpCas9 bound to 18-nucleotide complementary DNA substrate in the catalytic state
Method: single particle / : Pacesa M, Jinek M

EMDB-14500:
SpCas9 bound to 10-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

EMDB-14501:
SpCas9 bound to 18-nucleotide complementary DNA substrate in the checkpoint state
Method: single particle / : Pacesa M, Jinek M

PDB-7z4c:
SpCas9 bound to 6 nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

PDB-7z4e:
SpCas9 bound to 8-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

PDB-7z4g:
SpCas9 bound to 12-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

PDB-7z4h:
SpCas9 bound to 14-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

PDB-7z4i:
SpCas9 bound to 16-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

PDB-7z4j:
SpCas9 bound to 18-nucleotide complementary DNA substrate in the catalytic state
Method: single particle / : Pacesa M, Jinek M

PDB-7z4k:
SpCas9 bound to 10-nucleotide complementary DNA substrate
Method: single particle / : Pacesa M, Jinek M

PDB-7z4l:
SpCas9 bound to 18-nucleotide complementary DNA substrate in the checkpoint state
Method: single particle / : Pacesa M, Jinek M

EMDB-13976:
Cytochrome bcc-aa3 supercomplex (respiratory supercomplex III2/IV2) from Corynebacterium glutamicum (stigmatellin and azide bound)
Method: single particle / : Kao WC, Hunte C

EMDB-13977:
Cytochrome bcc-aa3 supercomplex (respiratory supercomplex III2/IV2) from Corynebacterium glutamicum (as isolated)
Method: single particle / : Kao WC, Hunte C

PDB-7qhm:
Cytochrome bcc-aa3 supercomplex (respiratory supercomplex III2/IV2) from Corynebacterium glutamicum (stigmatellin and azide bound)
Method: single particle / : Kao WC, Hunte C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more