[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 214 items for (author: liu & ys)

EMDB-65575:
Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

EMDB-65601:
Cryo-EM map of a 3-repeat filament from mouse oocyte Cytoplasmic Lattice (CPL)
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

EMDB-53353:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

PDB-9qtj:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

EMDB-51820:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-51899:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52095:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52299:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h3g:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h6i:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hes:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hmw:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-71739:
Legionella Dot/Icm T4SS
Method: subtomogram averaging / : Dutka P, Liu Y, Maggi S, Jensen GJ

EMDB-72186:
Focused refinement map of the periplasmic part of the Legionella pneumophila T4SS.
Method: subtomogram averaging / : Dutka P, Liu Y, Maggi S, Jensen GJ

EMDB-72187:
Focused refinement map of the cytoplasmic region of the Legionella pneumophila T4SS.
Method: subtomogram averaging / : Dutka P, Liu Y, Maggi S, Jensen GJ

EMDB-63614:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Z, Hauser AS, Carlsson J

EMDB-65211:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
Method: helical / : Li YS, Li DN, Dai B

EMDB-65213:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
Method: helical / : Li YS, Li DN, Dai B

EMDB-65214:
Cryo-EM structure of hnRAC1-2,8homobeta fibril
Method: helical / : Li YS, Li DN, Dai B

EMDB-49740:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2B3
Method: single particle / : Pletnev S, Kwong PD, Zhou T, Kwong P

EMDB-49741:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2C3
Method: single particle / : Pletnev S, Kwong PD, Zhou T, Kwong P

EMDB-49742:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V3A8f
Method: single particle / : Pletnev S, Kwong PD, Zhou T, Kwong P

PDB-9nrx:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2B3
Method: single particle / : Pletnev S, Kwong PD, Zhou T

PDB-9nry:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2C3
Method: single particle / : Pletnev S, Kwong PD, Zhou T

PDB-9nrz:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V3A8f
Method: single particle / : Pletnev S, Kwong PD, Zhou T

EMDB-71976:
Inactive-state naloxone-mu opioid receptor nanobody6 complex - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71977:
Inactive-state naloxone-mu opioid receptor nanobody6 complex - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71978:
Inactive-state naloxone-mu opioid receptor nanobody6 complex - Locally refined fiducal map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71979:
Nucleotide-free naloxone-mu opioid receptor Gi1 complex - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71980:
Nucleotide-free naloxone-mu opioid receptor Gi1 complex - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71981:
Nucleotide-free naloxone-mu opioid receptor Gi1 complex - Locally refined Gi map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71982:
Latent-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71983:
Latent-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71984:
Latent-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined Gi map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71985:
Unlatched-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71986:
Unlatched-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71987:
Unlatched-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined Gi map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71988:
Primed-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71989:
Primed-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71990:
Primed-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined Gi map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71991:
Engaged-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71992:
Engaged-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71993:
Engaged-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined Gi map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71998:
Primed-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-71999:
Primed-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined receptor map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72000:
Primed-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Locally refined Gi GDP map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72001:
Inactive-state naloxone-mu opioid receptor nanobody6 complex
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72002:
Nucleotide-free naloxone-mu opioid receptor Gi1 complex
Method: single particle / : Gati C, Han GW, Khan S

EMDB-72003:
Latent-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound)
Method: single particle / : Gati C, Han GW, Khan S

EMDB-72004:
Unlatched-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound)
Method: single particle / : Gati C, Han GW, Khan S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more