[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 11,734 items for (author: liu & m)

EMDB-73561:
Histamine-bound structure
Method: single particle / : Lu M, Liu B

EMDB-73562:
Serotonin-bound structure
Method: single particle / : Lu M, Liu B

PDB-9ywu:
Histamine-bound structure
Method: single particle / : Lu M, Liu B

PDB-9ywv:
Serotonin-bound structure
Method: single particle / : Lu M, Liu B

EMDB-59866:
Phosphorylated STING bound to adaptor protein complex 1 (processed for improved pSTING density)
Method: single particle / : Xu P, Ablasser A

EMDB-72943:
BG505gp140SOSIP.T332N_Q653L collected on 300 kV TFS Krios.
Method: single particle / : Atwood ED, Parsons RJ, Janowska K, Pathirage R, Sharma A, Acharya P

EMDB-72966:
BG505gp140SOSIP.T332N_Q653L collected on 100 kV Tundra with Falcon C detector
Method: single particle / : Atwood ED, Parsons RJ, Janowska K, Pathirage R, Sharma A, Acharya P

EMDB-57201:
Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.
Method: single particle / : Rabl J, Karousis ED

EMDB-57202:
Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.
Method: single particle / : Rabl J, Karousis ED

EMDB-57203:
Human monosomes, focus on 60S subunit; control.
Method: single particle / : Rabl J, Karousis ED

EMDB-57204:
Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2
Method: single particle / : Rabl J, Karousis ED

PDB-29iw:
Human monosomes with bound toxin NT-2, focus on 60S subunit. Cells treated with NT-2.
Method: single particle / : Rabl J, Karousis ED

PDB-29ix:
Human monosomes with bound toxin NT-2, focus on 60S subunit. NT-2 added to purified ribosomes as control.
Method: single particle / : Rabl J, Karousis ED

PDB-29iy:
Human monosomes, focus on 60S subunit; control.
Method: single particle / : Rabl J, Karousis ED

PDB-29iz:
Dormant 80S:eEF2:SERBP1:tRNA complex from human cells treated with toxin NT-2
Method: single particle / : Rabl J, Karousis ED

EMDB-77061:
95-bp double-stranded DNA minicircle: poly(A:T) model
Method: single particle / : Liu Y, Qin PZ

PDB-13gq:
95-bp double-stranded DNA minicircle: poly(A:T) model
Method: single particle / : Liu Y, Qin PZ

EMDB-74471:
Structure of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74472:
Raw consensus map of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74473:
Constituent EM map: Focused refinement on NTD/SPRY/Calstabin-1 of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74474:
Constituent EM map: Focused refinement on JSol/CSol of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74477:
Constituent EM map: Focused refinement on BSol of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74478:
Constituent EM map: Focused refinement on TaF/TMD/CTD of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74479:
Constituent EM map: Focused refinement on Ry12 of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74480:
Constituent EM map: Focused refinement on Ry34 of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74482:
Constituent EM map: Focused refinement on TMx region of RyR1 in presence of rosuvastatin (including auxiliary transmembrane helices TMx1 and TMx2; Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74484:
Raw consensus map of RyR1 in presence of rosuvastatin (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74486:
Structure of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74487:
Raw consensus map of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74488:
Constituent EM map: Focused refinement on NTD/SPRY/Calstabin-1 of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74489:
Constituent EM map: Focused refinement on JSol/CSol of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74491:
Constituent EM map: Focused refinement on BSol of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74492:
Constituent EM map: Focused refinement on TaF/TMD/CTD of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74493:
Constituent EM map: Focused refinement on Ry12 of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74494:
Constituent EM map: Focused refinement on Ry34 of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-74495:
Constituent EM map: Focused refinement on TMx region of RyR1 in complex with rosuvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-79135:
Cryo EM structure of a formate acetyltransferase (PFL) from Fannyhessea vaginae in complex with CoA
Method: single particle / : Liu L, Lovell S, Hammons AM, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-38td:
Cryo EM structure of a formate acetyltransferase (PFL) from Fannyhessea vaginae in complex with CoA
Method: single particle / : Liu L, Lovell S, Hammons AM, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-72401:
In situ structure of F7 pyocin in the post-ejection state on P. aeruginosa
Method: subtomogram averaging / : Tachiyama S, Kumar R, Liu J

EMDB-72402:
In situ structure of F7 pyocin attached to P. aeruginosa outer membrane
Method: subtomogram averaging / : Tachiyama S, Kumar R, Liu J

PDB-26hh:
Cryo-EM structure of Ll.LtrB Group II intron within graphene reservoir
Method: single particle / : Zheng LM, Song JL, Zhao XL, Liu N, Peng HL, Wang HW

EMDB-67325:
Cryo-EM structure of PI3Kalpha H1047R mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

EMDB-67327:
Cryo-EM structure of PI3Kalpha E545K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

EMDB-67328:
Cryo-EM structure of PI3Kalpha E542K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

PDB-9xw5:
Cryo-EM structure of PI3Kalpha H1047R mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

PDB-9xw7:
Cryo-EM structure of PI3Kalpha E545K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

PDB-9xw8:
Cryo-EM structure of PI3Kalpha E542K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

EMDB-63836:
Cryo-EM map of UBE3A monomer
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

EMDB-66273:
Structure of dimeric phosphomimetic mutant of Tribolium castaneum (Tc) PINK1
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

PDB-9wuw:
Structure of dimeric phosphomimetic mutant of Tribolium castaneum (Tc) PINK1
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more