[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 118 items for (author: liu & js)

EMDB-46824:
Polyclonal immune complex of human subject 321-2006 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46825:
Polyclonal immune complex of human subject 321-2009 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46827:
Polyclonal immune complex of human subject 321-2012 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46829:
Polyclonal immune complex of Fab from Cynomolgus Macaque 6974 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46830:
Polyclonal immune complex of Fab from Rhesus Macaque BB798E at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46831:
Polyclonal immune complex of Fab from Cynomolgus Macaque T009 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46832:
Polyclonal immune complex of Fab from Cynomolgus Macaque R996 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-45636:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-45637:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-48283:
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48286:
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48287:
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48290:
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48291:
253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-70490:
BG505 GT1.1 SOSIP in complex with gp41-base epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70491:
BG505 GT1.1 SOSIP in complex with V1V2V3 epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70492:
BG505 GT1.1 SOSIP in complex with C3V5 epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70493:
BG505 GT1.1 SOSIP in complex with CD4bs epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70494:
BG505 GT1.1 SOSIP in complex with gp41 glycan hole epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70495:
BG505 GT1.1 SOSIP in complex with gp41 fusion peptide epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

PDB-9mi0:
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mia:
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mib:
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mih:
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mii:
253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-47040:
Structure of rat beta-arrestin 1 by fiducial-assisted cryo-EM
Method: single particle / : Pakharukova N, Kahsai AW, Masoudi A, Lefkowitz RJ

EMDB-47042:
Structure of rat beta-arrestin 1 bound to allosteric inhibitor
Method: single particle / : Pakharukova N, Kahsai AW, Masoudi A, Lefkowitz RJ

EMDB-42839:
Structure of UT14 Fab in complex with the head domain of H3 (A/Singapore/INFIMH-16-0019/2016)
Method: single particle / : Park J, Georgiou G

EMDB-37072:
Cryo-EM structure of dimeric ATP-TTR-3
Method: single particle / : Chen XY, Jia GW, Su ZM

EMDB-43551:
CCHFV GP38 bound with ADI-46143 and ADI-46158 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-43552:
CCHFV GP38 bound with ADI-58062 and ADI-63530 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-43553:
CCHFV GP38 bound with ADI-58026 and ADI-63547 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-43604:
CCHFV GP38 bound to ADI-46152 and ADI-58048 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-41415:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody R27 targeting the CD4-binding site
Method: single particle / : Zhou T, Kwong PD, Xu J

EMDB-41416:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody G36 targeting the CD4-binding site
Method: single particle / : Zhou T, Kwong PD, Xu J

EMDB-41417:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing bi-specific antibody CAP256L-R27 targeting the CD4-binding site and the V2-apex
Method: single particle / : Zhou T, Morano NC, Roark RS, Kwong PD, Xu J

EMDB-16144:
Structure of the SARS-CoV-2 spike glycoprotein in complex with the macrocyclic peptide S1B3inL1
Method: single particle / : Hurdiss DL, Drulyte I

PDB-8bon:
Structure of the SARS-CoV-2 spike glycoprotein in complex with the macrocyclic peptide S1B3inL1
Method: single particle / : Hurdiss DL

EMDB-28178:
Structure of lineage IV Lassa virus glycoprotein complex (strain Josiah)
Method: single particle / : Perrett HR, Ward AB

EMDB-28179:
Structure of lineage II Lassa virus glycoprotein complex (strain NIG08-A41)
Method: single particle / : Perrett HR, Ward AB

EMDB-28180:
Structure of lineage V Lassa virus glycoprotein complex (strain Soromba-R)
Method: single particle / : Perrett HR, Ward AB

EMDB-28181:
Structure of lineage VII Lassa virus glycoprotein complex (strain Togo/2016/7082)
Method: single particle / : Perrett HR, Ward AB

EMDB-28182:
Lassa virus glycoprotein complex (Josiah) bound to 12.1F Fab
Method: single particle / : Perrett HR, Ward AB

EMDB-28183:
Lassa virus glycoprotein complex (Josiah) bound to 19.7E Fab
Method: single particle / : Perrett HR, Ward AB

EMDB-28184:
Lassa virus glycoprotein complex (Josiah) bound to S370.7 Fab
Method: single particle / : Perrett HR, Ward AB

PDB-8ejd:
Structure of lineage IV Lassa virus glycoprotein complex (strain Josiah)
Method: single particle / : Perrett HR, Ward AB

PDB-8eje:
Structure of lineage II Lassa virus glycoprotein complex (strain NIG08-A41)
Method: single particle / : Perrett HR, Ward AB

PDB-8ejf:
Structure of lineage V Lassa virus glycoprotein complex (strain Soromba-R)
Method: single particle / : Perrett HR, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more