[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 85 items for (author: lim & cs)

EMDB-63627:
Quintuple cluster of TNF-TNFR1 ectodomain complex

EMDB-63177:
Pentagonal cluster of BAFF-TACI ectodomain complex

EMDB-63178:
Pentagonal cluster of BAFF-BCMA ectodomain complex

EMDB-60549:
Cryo-EM structure of TNFa-TNFR1ecto-nanobody complex

EMDB-60484:
Binary cluster of TNF-TNFR1 ectodomain complex

EMDB-60485:
Pentagonal cluster of BAFF-BAFFR ectodomain complex

EMDB-60486:
Cluster structure of the BAFF-BAFFR-TRAF3 complex

EMDB-60487:
Pentagonal cluster of BAFF-BAFFR 3:3 complex

EMDB-60488:
Cluster structure of BAFF-BAFFR-TRAF3(His) complex

EMDB-60489:
Linear bent cluster of TNF-TNFR1 ectodomain complex

EMDB-60490:
Binary cluster of TNF-TNFR1 full-length complex

EMDB-60491:
Linear quadruple cluster of TNF-TNFR1 ectodomain complex

EMDB-60492:
Double pentagonal cluster of BAFF-BAFFR ectodomain complex

EMDB-60493:
Half spherical cluster of BAFF-BAFFR ectodomain complex

EMDB-60494:
Binary cluster of the TNF-TNFR1ecto-nanobody complex

EMDB-60497:
Trigonal pyramid cluster of TNF-TNFR1 ectodomain complex

EMDB-47775:
WEEV CBA87 VLP in complex with human PCDH10-EC1

EMDB-47821:
WEEV McMillan VLP in complex with VLDLR LA(1-2)

EMDB-47822:
SINV-WEEV Fleming in complex with VLDLR LA(1-2)

EMDB-47846:
RRV DKTA VLP in complex with VLDLR-LBD-Fc

PDB-9e96:
WEEV CBA87 VLP in complex with human PCDH10-EC1

PDB-9e9y:
WEEV McMillan VLP in complex with VLDLR LA(1-2)

PDB-9e9z:
SINV-WEEV Fleming in complex with VLDLR LA(1-2)

PDB-9eau:
RRV DKTA VLP in complex with VLDLR-LBD-Fc

EMDB-52074:
Structure of the Xenorceptide A2-bound E. coli BAM complex (BamABCDE)

EMDB-44392:
Structural mechanism of CB1R binding to peripheral and biased inverse agonists

EMDB-44393:
Structural mechanism of CB1R binding to peripheral and biased inverse agonists

EMDB-44394:
Structural mechanism of CB1R binding to peripheral and biased inverse agonists

PDB-9b9y:
Structural mechanism of CB1R binding to peripheral and biased inverse agonists

PDB-9b9z:
Structural mechanism of CB1R binding to peripheral and biased inverse agonists

PDB-9ba0:
Structural mechanism of CB1R binding to peripheral and biased inverse agonists

EMDB-42151:
Structure of the P1B7 antibody bound to the Sotorasib-modified KRas G12C peptide presented by the A*03:01 MHC I complex

PDB-8ufa:
Eastern equine encephalitis virus (PE-6) VLP (asymmetric unit)

PDB-8ufb:
Eastern equine encephalitis virus (PE-6) VLP in complex with full-length VLDLR (asymmetric unit)

PDB-8ufc:
Eastern equine encephalitis virus (PE-6) VLP in complex with VLDLR LA(1-2) (asymmetric unit)

EMDB-29227:
cryoEM structure of a broadly neutralizing antibody STI-9167

EMDB-40711:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor

PDB-8dan:
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor

PDB-8daq:
CryoEM structure of Western equine encephalitis virus VLP

PDB-8sqn:
CryoEM structure of Western equine encephalitis virus VLP in complex with the chimeric Du-D1-Mo-D2 MXRA8 receptor

EMDB-28644:
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor

PDB-8ewf:
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor

EMDB-28537:
cryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody STI-9167

EMDB-32844:
Toll-like receptor3 linear cluster

EMDB-32845:
ectoTLR3-poly(I:C) cluster

EMDB-32846:
ectoTLR3-poly(I:C)

EMDB-32851:
CT-mut (D523K,D524K,E527K) TLR3-poly(I:C) complex

EMDB-32852:
ectoTLR3-mAb12-poly(I:C) complex

EMDB-32853:
NT-mut(K117D,K139D,K145D) TLR3 -poly I:C complex

EMDB-34361:
TLR3(A795H)-poly(I:C) complex

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more