[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,718 items for (author: li & ct)

EMDB-54696:
Chlorophyll synthase in complex with the LHC-like protein HliD, apo state
Method: single particle / : Shvarev D, Hitchcock A, Sobotka R

EMDB-49696:
Subtomogram Average of the Nipah Virus Matrix Lattice in Complex with Human Cell Membrane inside Virus-Like-Particles
Method: subtomogram averaging / : Upadhye VV, Dick RA

PDB-9nqy:
Nipah Virus Matrix Lattice in Complex with Human Cell Membrane
Method: subtomogram averaging / : Upadhye VV, Dick RA

EMDB-54697:
Chlorophyll synthase in complex with the LHC-like protein HliD, GGPP-bound state
Method: single particle / : Shvarev D, Hitchcock A, Sobotka R

EMDB-54698:
Chlorophyll synthase in complex with the LHC-like protein HliD, apo state, consensus map
Method: single particle / : Shvarev D, Hitchcock A, Sobotka R

EMDB-54699:
Chlorophyll synthase in complex with the LHC-like protein HliD, GGPP-bound state, consensus map
Method: single particle / : Shvarev D, Hitchcock A, Sobotka R

EMDB-54700:
Chlorophyll synthase in complex with the LHC-like protein HliD, ChlGx1-HliDx2 complex, apo sample
Method: single particle / : Shvarev D, Hitchcock A, Sobotka R

EMDB-54701:
Chlorophyll synthase in complex with the LHC-like protein HliD, ChlGx1-HliDx2 complex, GGPP sample
Method: single particle / : Shvarev D, Hitchcock A, Sobotka R

EMDB-72409:
Metabotropic Glutamate Receptor 7 in complex with ecto-domain of Extracellular Leucine Rich Repeat and Fibronectin Type III Domain Containing 2
Method: single particle / : Ludlam WG, Chang CT, Liauw BW, Cho HJ, Sawh-Gopal A, Izard T, Bao H, Dunn HA, Vafabakhsh R, Martemyanov KA

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-56861:
In situ ribosome from HeLa cells
Method: subtomogram averaging / : Gemin O, Babenko A, Papp G

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-71602:
Cryo-EM structure of VX77 Fab in complex with GII.4 Norovirus P domain
Method: single particle / : Jo G, Ward AB

EMDB-71603:
Cryo-EM structure of VX93 Fab in complex with GII.4 Norovirus P domain
Method: single particle / : Jo G, Ward AB

EMDB-72540:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX77 Fab
Method: single particle / : Jo G, Ward AB

EMDB-72541:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab
Method: single particle / : Jo G, Ward AB

EMDB-72542:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (4 Fabs)
Method: single particle / : Jo G, Ward AB

EMDB-72543:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (5 Fabs-1)
Method: single particle / : Jo G, Ward AB

EMDB-72544:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (5 Fabs-2)
Method: single particle / : Jo G, Ward AB

EMDB-72545:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (3 Fabs-1)
Method: single particle / : Jo G, Ward AB

EMDB-72546:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - fivefold axis local map (3 Fabs-2)
Method: single particle / : Jo G, Ward AB

EMDB-72547:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (1 Fab)
Method: single particle / : Jo G, Ward AB

EMDB-72548:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (2 Fabs-1)
Method: single particle / : Jo G, Ward AB

EMDB-72549:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (2 Fabs-2)
Method: single particle / : Jo G, Ward AB

EMDB-72550:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (2 Fabs-3)
Method: single particle / : Jo G, Ward AB

EMDB-72551:
Cryo-EM map of norovirus GII.4 SY 2012 VLP in complex with VX93 Fab - threefold axis local map (3 Fabs)
Method: single particle / : Jo G, Ward AB

PDB-9pfj:
Cryo-EM structure of VX77 Fab in complex with GII.4 Norovirus P domain
Method: single particle / : Jo G, Ward AB

PDB-9pfk:
Cryo-EM structure of VX93 Fab in complex with GII.4 Norovirus P domain
Method: single particle / : Jo G, Ward AB

EMDB-56105:
The ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer).
Method: single particle / : Roversi P, Hitchman CJ, Lia A, Bayo Y, Gooptu B

EMDB-73720:
Mitochondrial Creatine Kinase in complex with uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

PDB-9pi7:
EV-D68 in complex with G12 VHH
Method: single particle / : Klose T, Kuhn RJ, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-57361:
The complex of A1AT-NHK with the ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer).
Method: single particle / : Roversi P, Hitchman CJ, Gooptu B, Bhogadia M, Lia A

PDB-9nz0:
Cryo-EM structure of vaccine elicited antibody 22F5 bound to the post-fusion conformation of the LayV-F glycoprotein
Method: single particle / : Kumar U, May A, Acharya P

PDB-9pi8:
EV-D68 in complex with G12 Fc
Method: single particle / : Klose T, Kuhn RJ, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-56607:
CryoEM structure of guanidinase from Nitrospira inopinata
Method: single particle / : Prokhorova I, Lecomte L, Papp G, Schreiner C, Djinovic-Carugo K

EMDB-56821:
C.t. INO80 chromatin remodeler bound to nucleosome
Method: single particle / : Lecomte L, Grozavu DM, Kolesnikova O, Eustermann S

EMDB-56855:
Cryo-EM structure of yeast ribosome solved with EasyGrid
Method: single particle / : Gemin O, Papp G

EMDB-48715:
Cryo-EM map of vaccine elicited antibody 22F5 bound to post-fusion conformation of Langya virus F protein
Method: single particle / : Kumar U, Acharya P

EMDB-49948:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

PDB-9nz2:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

EMDB-54010:
Human Signal Peptidase in complex with artificial Signal Peptide L11
Method: single particle / : Liaci AM, Vismpas D, Skalidis I, Koh FA, Abhay K, Forster GF

EMDB-54011:
Apo Structure of the Human Signal Peptidase
Method: single particle / : Liaci AM, Vismpas D, Skalidis I, Koh FA, Abhay K, Forster GF

EMDB-75498:
KpSwz DUF4062 (Hexamer, catalytic mutant E97A)
Method: single particle / : Osinski A, Lopez VA, Tagliabracci VS

EMDB-75622:
KpSwz in complex with bacteriophage Bas14 Portal
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75626:
KpSwz DUF4062 (Tetramer, catalytic mutant E97A)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75638:
Human Brain RNA Vault Shoulder bound to ADPR, focused refinement (EMPIAR-10766)
Method: single particle / : Osinski A, Tagliabracci VS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more