[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,346 items for (author: li & ct)

EMDB-49340:
Cryo-EM map of the Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-49341:
Cryo-EM composite map of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-49342:
Cryo-EM consensus map of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-49343:
Cryo-EM focus map of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

PDB-9nez:
Structure of the Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

PDB-9nf0:
Structure of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-52348:
Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
Method: single particle / : Tobiasson V, Shikha S, Muhleip A

EMDB-52551:
Cryo-EM structure of the large subunit of the mitochondrial ribosome from Toxoplasma gondii
Method: single particle / : Tobiasson V, Shikha S, Muhleip A

PDB-9hqv:
Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
Method: single particle / : Tobiasson V, Shikha S, Muhleip A

PDB-9i05:
Cryo-EM structure of the large subunit of the mitochondrial ribosome from Toxoplasma gondii
Method: single particle / : Tobiasson V, Shikha S, Muhleip A

EMDB-49366:
Tuna P-glycoprotein Apo Conformation 1
Method: single particle / : Young MA, Rees SD, Nicklisch SCT, Stowell M, Hamdoun A, Chang G, Center for Structures of Membrane Proteins (CSMP)

EMDB-49367:
Tuna P-glycoprotein Apo Conformation 2
Method: single particle / : Young MA, Rees SD, Nicklisch SCT, Stowell M, Hamdoun A, Chang G

EMDB-49368:
Tuna P-glycoprotein Apo Conformation 3
Method: single particle / : Young MA, Rees SD, Nicklisch SCT, Stowell M, Hamdoun A, Chang G

EMDB-49369:
Tuna P-glycoprotein Apo Conformation 4
Method: single particle / : Young MA, Rees SD, Nicklisch SCT, Stowell M, Hamdoun A, Chang G

EMDB-49370:
Tuna P-glycoprotein bound to DDT
Method: single particle / : Young MA, Rees SD, Nicklisch SCT, Stowell M, Hamdoun A, Chang G

PDB-9nfi:
Tuna P-glycoprotein Apo Conformation 1
Method: single particle / : Young MA, Rees SD, Nicklisch SCT, Stowell M, Hamdoun A, Chang G, Center for Structures of Membrane Proteins (CSMP)

EMDB-60260:
cryo-EM map of N8_Cullin1/Rbx1/Skp1/Skp2/Cks2/p27 in complex with Extension Probe-Ub4 at a resolution of 7.05 angstrom
Method: single particle / : Ai HS, Liang LJ, Li CT, Zhao FY, Zhang LY, Li JH

EMDB-60258:
conformation 2 cryo-EM map of N8_Cullin1/Rbx1/Skp1/Skp2/Cks2/p27 in complex with Extension Probe-Ub2 at a resolution of 7.64 angstrom
Method: single particle / : Ai HS, Liang LJ, Li CT, Zhao FY, Zhang LY, Li JH

EMDB-60259:
conformation 3 cryo-EM map of N8_Cullin1/Rbx1/Skp1/Skp2/Cks2/p27 in complex with Extension Probe-Ub2 at a resolution of 8.33 angstrom
Method: single particle / : Ai HS, Liang LJ, Li CT, Zhao FY, Zhang LY, Li JH

EMDB-60261:
Skeleton cryo-EM map of N8_Cullin1/Rbx1/Skp1/Skp2/Cks2/p27 in complex with Extension Probe-Ub4 at a resolution of 4.51 angstrom
Method: single particle / : Ai HS, Liang LJ, Li CT, Zhao FY, Zhang LY, Li JH

EMDB-60257:
conformation 1 cryo-EM map of N8_Cullin1/Rbx1/Skp1/Skp2/Cks2/p27 in complex with Extension Probe-Ub2 at a resolution of 8.07 angstrom
Method: single particle / : Ai HS, Liang LJ, Li CT, Zhao FY, Zhang LY, Li JH

EMDB-60476:
Cryo-EM structure of the Cas13a-rAcrVIA1 complex
Method: single particle / : Zhang JT, Li YL, Jia N

PDB-8zty:
Cryo-EM structure of the Cas13a-rAcrVIA1 complex
Method: single particle / : Zhang JT, Li YL, Jia N

EMDB-47951:
GPCR A family receptor
Method: single particle / : Bi M, Wang X, Ye L, Cheng Y

EMDB-47952:
GPCR A family receptor
Method: single particle / : Bi M, Wang X, Ye L, Cheng Y

EMDB-47953:
GPCR A family receptor
Method: single particle / : Bi M, Wang X, Ye L, Cheng Y

PDB-9ee8:
GPCR A family receptor
Method: single particle / : Bi M, Wang X, Ye L, Cheng Y

PDB-9ee9:
GPCR A family receptor
Method: single particle / : Bi M, Wang X, Ye L, Cheng Y

PDB-9eea:
GPCR A family receptor
Method: single particle / : Bi M, Wang X, Ye L, Cheng Y

PDB-9n9d:
MicroED structure of papain co-crystallized with E-64C
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nae:
MicroED structure of papain co-crystallized with E-64
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nag:
MicroED structure of the apo-form of papain
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nao:
MicroED structure of papain complexed with natural product E64-A65
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nar:
MicroED structure of papain microcrystals soaked with E-64 for 10 minutes
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nax:
MicroED structure of the papain-E-64 complex from microcrystals soaked with crude biosynthetic reaction mixture
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nay:
MicroED structure of papain complexed with natural product E-64-A65 from microcrystals soaked in crude biosynthetic reaction mixture
Method: electron crystallography / : Vlahakis NW, Rodriguez JA

PDB-9nbp:
MicroED structure of the papain-E-64 complex from microcrystals mixed on-grid with microarrayed ligand
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nbq:
MicroED structure of papain co-crystallized with E-64D
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nc1:
MicroED structure of papain-E-64 complex from microcrystals soaked with protease inhibitor cocktail
Method: electron crystallography / : Vlahakis N, Rodriguez JA

PDB-9nca:
MicroED structure of microcrystals soaked with a mixture of E-64, E-64C, and E-64D
Method: electron crystallography / : Vlahakis N, Rodriguez JA

EMDB-61484:
Cryo-EM structure of the C18:0 ceramide-bound FPR2-Gi complex
Method: single particle / : Sun JP, Jiang CT, Kong W, Yu X, Cai K, Guo LL

EMDB-46908:
Recombinant AD-fold Paired Helical Filament Polymorph
Method: helical / : Vaquer-Alicea J, Diamond MI, Kunach P

EMDB-46915:
Recombinant AD-fold Quadruple Helical Filament Polymorph
Method: helical / : Vaquer-Alicea J, Diamond MI, Kunach P

EMDB-48423:
Angavokely virus (AngV) fusion (F) protein ectodomain in pre-fusion conformation
Method: single particle / : Lella M, Acharya P

EMDB-48535:
AngV-F Pre-fusion Protein
Method: single particle / : Lella M, Acharya P

PDB-9mnh:
Angavokely virus (AngV) fusion (F) protein ectodomain in pre-fusion conformation
Method: single particle / : Lella M, Acharya P

PDB-9mqn:
AngV-F Pre-fusion Protein
Method: single particle / : Lella M, Acharya P

EMDB-45253:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9c6o:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-47823:
Structure of the prefusion HKU5-19s Spike trimer (conformation 1)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more