[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 317 items for (author: lella & m)

EMDB-73731:
SARS-CoV-2 spike S2 in complex with antibody B3-1
Method: single particle / : Zhou L, Hsieh C, McLellan JS

EMDB-73735:
SARS-CoV-2 spike S2 in complex with antibody N6-2
Method: single particle / : Zhou L, Hsieh C, McLellan JS

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-73730:
SARS-CoV-2 spike S2 in complex with antibody B3-1
Method: single particle / : Zhou L, Hsieh C, McLellan JS

PDB-9z12:
SARS-CoV-2 spike S2 in complex with antibody B3-1
Method: single particle / : Zhou L, Hsieh C, McLellan JS

EMDB-73732:
SARS-CoV-2 spike S2 in complex with antibody N6-2
Method: single particle / : Zhou L, Hsieh C, McLellan JS

PDB-9z18:
SARS-CoV-2 spike S2 in complex with antibody N6-2
Method: single particle / : Zhou L, Hsieh C, McLellan JS

EMDB-72934:
HCoV-HKU1 C S 2P in complex with H501-008 Fab (global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72935:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 1, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72936:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 2, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72937:
HCoV-HKU1 C S 2P in complex with H501-018 Fab (local cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72938:
HCoV-HKU1 C S 2P in complex with H501-022 Fab (global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72939:
HCoV-HKU1 C S 2P in complex with H501-022 Fab (local cryoEM)
Method: single particle / : Vasquez S, Barnes CO

PDB-9ygn:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 1, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

PDB-9ygo:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 2, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

PDB-9ygp:
HCoV-HKU1 C S 2P in complex with H501-018 Fab (local cryoEM)
Method: single particle / : Vasquez S, Barnes CO

PDB-9ygq:
HCoV-HKU1 C S 2P in complex with H501-022 Fab (global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

PDB-9ygr:
HCoV-HKU1 C S 2P in complex with H501-022 Fab (local cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72060:
HCMV trimer in complex with E4K, E11K, A9K, E9L, E8K, B1K, E7K, F12L and E10L Fabs
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-72061:
HCMV trimer in complex with G1L (II), G1L (A), B5L, C4K, B1K, A7K, A12K, and C5K Fabs
Method: single particle / : Goldsmith JA, McLellan JS

PDB-9pzb:
HCMV trimer in complex with E4K, E11K, A9K, E9L, E8K, B1K, E7K, F12L and E10L Fabs
Method: single particle / : Goldsmith JA, McLellan JS

PDB-9pzc:
HCMV trimer in complex with G1L (II), G1L (A), B5L, C4K, B1K, A7K, A12K, and C5K Fabs
Method: single particle / : Goldsmith JA, McLellan JS

PDB-9nz0:
Cryo-EM structure of vaccine elicited antibody 22F5 bound to the post-fusion conformation of the LayV-F glycoprotein
Method: single particle / : Kumar U, May A, Acharya P

EMDB-48715:
Cryo-EM map of vaccine elicited antibody 22F5 bound to post-fusion conformation of Langya virus F protein
Method: single particle / : Kumar U, Acharya P

EMDB-49948:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

PDB-9nz2:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

EMDB-72883:
Defense-associated reverse transcriptase 1 (DRT1) filament
Method: single particle / : Johnson NV, McLellan JS

PDB-9yfd:
Defense-associated reverse transcriptase 1 (DRT1) filament
Method: single particle / : Johnson NV, McLellan JS

EMDB-49835:
SARS-CoV-2 BA.1 S6P (HexaPro) + COV2-3835 Fab Local Refinement Map (RBD + Fv)
Method: single particle / : Ramamohan AR, Johnson NV, McLellan JS

PDB-9nvg:
Structure of SARS-CoV-2 BA.1 spike RBD bound to COV2-3835 Fab
Method: single particle / : Ramamohan AR, Johnson NV, McLellan JS

EMDB-71266:
Andes virus glycoprotein tetramer in complex with ADI-65534 Fab (Global map)
Method: single particle / : McFadden E, Guo L, McLellan JS

EMDB-71267:
Andes virus glycoprotein tetramer in complex with ADI-65534 Fab (Local map)
Method: single particle / : McFadden E, Guo L, McLellan JS

EMDB-49799:
SARS-CoV-2 BA.1 S6P (HexaPro) + COV2-3835 Fab Global Map
Method: single particle / : Ramamohan AR, Johnson NV, McLellan JS

EMDB-74907:
Soluble ectodomain of Herpes simplex virus 2 (HSV-2) glycoprotein B (gB) in the prefusion conformation in complex with 2c and D48 Fabs
Method: single particle / : Sponholtz MR, Johnson NV, McLellan JS

PDB-9zwe:
Soluble ectodomain of Herpes simplex virus 2 (HSV-2) glycoprotein B (gB) in the prefusion conformation in complex with 2c and D48 Fabs
Method: single particle / : Sponholtz MR, Johnson NV, McLellan JS

EMDB-70288:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

EMDB-73043:
Cryo-EM structure of post-fusion EBV gB in complex with AMMO2 fab
Method: single particle / : Chou CW, McCool RS, McLellan JS

PDB-9oal:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

PDB-9yka:
Cryo-EM structure of post-fusion EBV gB in complex with AMMO2 fab
Method: single particle / : Chou CW, McCool RS, McLellan JS

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-48331:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

PDB-9mkn:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

EMDB-45286:
Cryo EM map of SARS-COV-2 (BQ 1.1) spike protein in complex with Fab COV2-3891 (2 open 1 close)
Method: single particle / : Binshtein E, Crowe JE

EMDB-45287:
Cryo EM structure of SARS-COV-2 (BQ 1.1) RBD in complex with Fab COV2-3891 (local refine)
Method: single particle / : Binshtein E, Crowe JE

PDB-9c7s:
Cryo EM structure of SARS-COV-2 (BQ 1.1) RBD in complex with Fab COV2-3891 (local refine)
Method: single particle / : Binshtein E, Crowe JE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more