[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 46 items for (author: koller & to)

EMDB-51946:
Cryo-EM structure of the Vibrio natrigens 30S ribosomal subunit in complex with spectinomycin.
Method: single particle / : Raulf KF, Koller TO, Beckert B, Morici M, Lepak A, Bange G, Wilson DN

EMDB-51947:
Cryo-EM structure of the Vibrio natrigens 50S ribosomal subunit in complex with the proline-rich antimicrobial peptide Bac5(1-17).
Method: single particle / : Raulf KF, Koller TO, Beckert B, Morici M, Lepak A, Bange G, Wilson DN

EMDB-18950:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
Method: single particle / : Koller TO, Wilson DN

EMDB-19004:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
Method: single particle / : Koller TO, Wilson DN

PDB-8r6c:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
Method: single particle / : Koller TO, Wilson DN

PDB-8r8m:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
Method: single particle / : Koller TO, Wilson DN

EMDB-50296:
70S Escherichia coli ribosome with P-site initiatior tRNA.
Method: single particle / : Koller TO, Wilson DN

PDB-9fbv:
70S Escherichia coli ribosome with P-site initiatior tRNA.
Method: single particle / : Koller TO, Wilson DN

EMDB-16520:
Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Wilson DN

EMDB-16620:
Eravacycline bound to the 30S head
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

EMDB-16652:
Tiamulin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16526:
Streptomycin and Hygromycin B bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16530:
Evernimicin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16536:
empty 30S head
Method: single particle / : Paternoga H, Beckert B, Wilson DN

EMDB-16613:
Retapamulin and Capreomycin bound to the 50S subunit
Method: single particle / : Paternoga H, Beckert B, Wilson DN

EMDB-16615:
Tetracycline bound to the 30S head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

EMDB-16641:
Clindamycin bound to the 50S subunit
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

EMDB-16644:
Pentacycline TP038 bound to the 30S head
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16645:
Streptomycin bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

EMDB-16650:
Apramycin bound to the 30S body
Method: single particle / : Paternoga H, Koller TO, Beckert B, Wilson DN

EMDB-16651:
Gentamicin bound to the 30S body
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Novacek J, Wilson DN

EMDB-16612:
Kasugamycin bound to the 30S body
Method: single particle / : Paternoga H, Beckert B, Wilson DN

EMDB-16646:
Lincomycin and Avilamycin bound to the 50S subunit
Method: single particle / : Paternoga H, Crowe-McAuliffe C, Beckert B, Wilson DN

EMDB-15488:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
Method: single particle / : Koller TO, Morici M, Wilson DN

EMDB-15523:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome
Method: single particle / : Koller TO, Morici M, Wilson DN

EMDB-15533:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit
Method: single particle / : Koller TO, Morici M, Wilson DN

EMDB-15905:
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Method: single particle / : Koller TO, Graf M, Wilson DN

PDB-8b7y:
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Method: single particle / : Koller TO, Graf M, Wilson DN

EMDB-14121:
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Method: single particle / : Koller TO, Beckert B, Wilson DN

PDB-7qq3:
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Method: single particle / : Koller TO, Beckert B, Wilson DN

EMDB-15161:
Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

EMDB-15175:
Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

EMDB-15204:
Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

EMDB-15670:
Cryo-EM volume of HflX bound to the Listeria monocytogenes 50S ribosomal subunit
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

EMDB-15864:
Cryo-EM map of lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

PDB-8a57:
Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

PDB-8a5i:
Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

PDB-8a63:
Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.
Method: single particle / : Koller TO, Crowe-McAuliffe C, Wilson DN

EMDB-26486:
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Method: single particle / : Rundlet EJ, Wieland M, Holm M, Koller TO, Blanchard SC, Wilson DN

EMDB-13058:
Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B
Method: single particle / : Wieland M, Koller TO

EMDB-11951:
Context-specific inhibition of eukaryotic translation by macrolide antibiotics
Method: single particle / : Koller TO, Wilson DN

EMDB-3906:
Cryo-EM density map of the human PLC editing module
Method: single particle / : Januliene D, Blees A, Trowitzsch S, Tampe R, Moeller A

PDB-6eny:
Structure of the human PLC editing module
Method: single particle / : Trowitzsch S, Januliene D, Blees A, Moeller A, Tampe R

EMDB-3904:
CryoEM density map of the pseudosymmetric PLC editing modules
Method: single particle / : Januliene D, Blees A, Trowitzsch S, Tampe R, Moeller A

EMDB-3905:
Cryo-EM density map of the human MHC-I peptide loading complex
Method: single particle / : Januliene D, Blees A, Trowitzsch S, Tampe R, Moeller A

EMDB-3405:
Mammalian 80S Ribosomes Associate with a Novel Vesicular Organelle
Method: subtomogram averaging / : Carter SD, Hampton CM, Langlois R, Grassucci RA, Farino ZJ, Morgenstern TM, Rice WJ, Velasco KR, Wigge C, Xu Y, Koller A, Melero R, Mitchell WG, Yi E, Aguilar JI, Levy ES, Greenberg NL, Li W, Courel M, Mahata SK, Freyberg R, Javitch JA, Di Paolo G, Chen EI, Chan RB, Carazo JM, Area-Gomez E, Jensen GJ, Frank J, Freyberg Z

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more