[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,953 items for (author: ko & s)

EMDB-45001:
Structure of Mnx H340A complex from Bacillus sp. PL-12

PDB-9bxa:
Structure of Mnx H340A complex from Bacillus sp. PL-12

EMDB-60655:
Orf virus scaffolding protein Orfv075

PDB-9ikc:
Orf virus scaffolding protein Orfv075

PDB-9cth:
Preliminary map of the Prothrombin-prothrombinase complex on nano discs

EMDB-18002:
Cryo-EM structure of horse NHE9 with a extracellular loop

PDB-8pxb:
Cryo-EM structure of horse NHE9 with a extracellular loop

EMDB-18048:
Neck of phage 812 after tail contraction (C6)

PDB-8q01:
Neck of phage 812 after tail contraction (C6)

EMDB-45749:
Cryo-EM structure of human claudin-4 complex with Clostridium perfringens enterotoxin, sFab COP-1, and Nanobody

EMDB-45235:
Subtomogram average (C1) of fatty acid synthase from S.cerevisiae prepared using cryo-plasmaFIB milling

EMDB-39482:
mouse proteasome 20S subunit in complex with compound 1

EMDB-39565:
canine immunoproteasome 20S subunit in complex with compound 2

EMDB-39600:
canine immunoproteasome 20S subunit in complex with compound 1

EMDB-39612:
canine immunoproteasome 20S subunit in complex with compound 1

PDB-8ypk:
mouse proteasome 20S subunit in complex with compound 1

PDB-8ysx:
canine immunoproteasome 20S subunit in complex with compound 2

PDB-8yvg:
canine immunoproteasome 20S subunit in complex with compound 1

PDB-8yvp:
canine immunoproteasome 20S subunit in complex with compound 1

EMDB-17996:
Hepatitis B core protein with bound Geraniol

EMDB-18000:
Hepatitis B core protein with bound P1dC

EMDB-18001:
Hepatitis B core protein with bound SLLGRM-dimer

EMDB-43139:
SARS-CoV-2 Spike S2 bound to Fab 54043-5

EMDB-36488:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Composite map)

EMDB-37212:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Receptor original map)

EMDB-37214:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Ligand/CCL7 focused map)

PDB-8jps:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Composite map)

EMDB-18973:
Cryo-EM structure of Human SHMT1

PDB-8r7h:
Cryo-EM structure of Human SHMT1

EMDB-44389:
Cryo-EM structure of the ZBTB5 BTB domain filament

EMDB-44391:
Cryo-EM structure of the ZBTB9 BTB domain filament

PDB-9b9r:
Cryo-EM structure of the ZBTB5 BTB domain filament

PDB-9b9v:
Cryo-EM structure of the ZBTB9 BTB domain filament

EMDB-43762:
Aca2 from Pectobacterium phage ZF40 bound to RNA

PDB-8w35:
Aca2 from Pectobacterium phage ZF40 bound to RNA

EMDB-50621:
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 2)

EMDB-50628:
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)

PDB-9fof:
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 2)

PDB-9for:
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)

EMDB-39119:
Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence

EMDB-39120:
Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant

PDB-8ybj:
Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence

PDB-8ybk:
Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant

EMDB-18950:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.

EMDB-19004:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.

PDB-8r6c:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.

PDB-8r8m:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.

EMDB-44457:
80S ribosome with angiogenin and ternary complex in rabbit reticulocyte lysates

EMDB-44458:
80S ribosome with angiogenin, in vitro assembled complex without substrate tRNA

EMDB-44459:
80S ribosome with H13A angiogenin

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more