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Showing all 36 items for (author: kikuchi & m)
![](data/emdb/media/34588/emdbimg.jpg)
EMDB-34588:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34589/emdbimg.jpg)
EMDB-34589:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34590/emdbimg.jpg)
EMDB-34590:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (3.9 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Sato S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34591/emdbimg.jpg)
EMDB-34591:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34592/emdbimg.jpg)
EMDB-34592:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34593/emdbimg.jpg)
EMDB-34593:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 3
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Sato S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34594/emdbimg.jpg)
EMDB-34594:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34595/emdbimg.jpg)
EMDB-34595:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34596/emdbimg.jpg)
EMDB-34596:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/34597/emdbimg.jpg)
EMDB-34597:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8hag.jpg)
PDB-8hag:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8hah.jpg)
PDB-8hah:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8hai.jpg)
PDB-8hai:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8haj.jpg)
PDB-8haj:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8hak.jpg)
PDB-8hak:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8hal.jpg)
PDB-8hal:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8ham.jpg)
PDB-8ham:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/pdb/img/8han.jpg)
PDB-8han:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T
![](data/emdb/media/33200/emdbimg.jpg)
EMDB-33200:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-ordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K
![](data/emdb/media/33201/emdbimg.jpg)
EMDB-33201:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K
![](data/emdb/media/33298/emdbimg.jpg)
EMDB-33298:
Cryo-EM map of apo-DNMT1 (aa:351-1616)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Matsuzawa S, Arita K
![](data/emdb/media/33299/emdbimg.jpg)
EMDB-33299:
Cryo-EM map of DNMT1 (aa:351-1616) in complex with ubiquitinated H3
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K
![](data/pdb/img/7xi9.jpg)
PDB-7xi9:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-ordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K
![](data/pdb/img/7xib.jpg)
PDB-7xib:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K
![](data/emdb/media/32192/emdbimg.jpg)
EMDB-32192:
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES DIMER
Method: single particle / : Tani K, Kanno R, Kawamura S, Kikuchi R, Nagashima KVP, Hall M, Takahashi A, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
![](data/emdb/media/32193/emdbimg.jpg)
EMDB-32193:
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES LACKING PROTEIN-U
Method: single particle / : Tani K, Kanno R, Kawamura S, Kikuchi R, Nagashima KVP, Hall M, Takahashi A, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
![](data/pdb/img/7vy2.jpg)
PDB-7vy2:
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES DIMER
Method: single particle / : Tani K, Kanno R, Kawamura S, Kikuchi R, Nagashima KVP, Hall M, Takahashi A, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
![](data/pdb/img/7vy3.jpg)
PDB-7vy3:
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES LACKING PROTEIN-U
Method: single particle / : Tani K, Kanno R, Kawamura S, Kikuchi R, Nagashima KVP, Hall M, Takahashi A, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
![](data/emdb/media/31400/snaps2.jpg)
EMDB-31400:
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES MONOMER
Method: single particle / : Tani K, Nagashima VP, Kanno R, Kawamura S, Kikuchi R, Ji XC, Hall M, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
![](data/pdb/media/7f0l/snapsdep.jpg)
PDB-7f0l:
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES MONOMER
Method: single particle / : Tani K, Nagashima VP, Kanno R, Kawamura S, Kikuchi R, Ji XC, Hall M, Yu LJ, Kimura Y, Madigan MT, Mizoguchi A, Humbel BM, Wang-Otomo ZY
![](data/emdb/media/3662/snaps2.jpg)
EMDB-3662:
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3)
Method: single particle / : Lopez-Alonso JP, Kaminishi T
![](data/emdb/media/3663/snaps2.jpg)
EMDB-3663:
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3)
Method: single particle / : Lopez-Alonso JP, Kaminishi T
![](data/pdb/media/5no3/snapsdep.jpg)
PDB-5no3:
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3)
Method: single particle / : Lopez-Alonso JP, Kaminishi T, Kikuchi T, Hirata Y, Iturrioz I, Dhimole N, Schedlbauer A, Hase Y, Goto S, Kurita D, Muto A, Zhou S, Naoe C, Mills DJ, Gil-Carton D, Takemoto C, Himeno H, Fucini P, Connell SR
![](data/pdb/media/5no4/snapsdep.jpg)
PDB-5no4:
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3)
Method: single particle / : Lopez-Alonso JP, Kaminishi T, Kikuchi T, Hirata Y, Iturrioz I, Dhimole N, Schedlbauer A, Hase Y, Goto S, Kurita D, Muto A, Zhou S, Naoe C, Mills DJ, Gil-Carton D, Takemoto C, Himeno H, Fucini P, Connell SR
![](data/emdb/media/3661/snaps2.jpg)
EMDB-3661:
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate)
Method: single particle / : Lopez-Alonso JP, Kaminishi T
![](data/pdb/media/5no2/snapsdep.jpg)
PDB-5no2:
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate)
Method: single particle / : Lopez-Alonso JP, Kaminishi T, Kikuchi T, Hirata Y, Iturrioz I, Dhimole N, Schedlbauer A, Hase Y, Goto S, Kurita D, Muto A, Zhou S, Naoe C, Mills DJ, Gil-Carton D, Takemoto C, Himeno H, Fucini P, Connell SR