[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 14,051 items for (author: ju & k)

EMDB-55083:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-55091:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spf:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spi:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-45969:
Local refinement of the SARS-CoV-2 BA.2.86 RBD in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-45971:
Local refinement of the SARS-CoV-2 BA.2.86 NTD
Method: single particle / : Lee J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-45972:
SARS-CoV-2 BA.2.86 Spike trimer in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwp:
Local refinement of the SARS-CoV-2 BA.2.86 RBD in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwq:
Local refinement of the SARS-CoV-2 BA.2.86 NTD
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwr:
SARS-CoV-2 BA.2.86 Spike trimer in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9i5c:
Inner layer protein P1 chains in transcribing particles of bacteriophage phi6
Method: single particle / : Kumpula EP, Ilca SL, Huiskonen JT

PDB-9i7w:
Extended and wrapped protein P7 dimers of dimers, the P1 layer and the RNA-dependent RNA polymerase P2 in transcribing particles of bacteriophage phi6
Method: single particle / : Kumpula EP, Ilca SL, Huiskonen JT

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-70277:
The structure of TdfH from Neisseria gonorrhoeae
Method: single particle / : Bera A, Noinaj N

PDB-9oaa:
The structure of TdfH from Neisseria gonorrhoeae
Method: single particle / : Bera A, Noinaj N

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-54198:
In-situ structure of cytoplasmic ring of NPC of CEM T lymphoblast cell
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-52379:
Transcribing double-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52380:
Transcribing single-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52381:
Localized reconstruction of packaging hexamer P4 from polar region of transcribing single-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52382:
Localized reconstruction of packaging hexamer P4 from equatorial region of transcribing single-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52383:
Localized reconstruction of packaging hexamer P4 from polar region of transcribing double-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52384:
Localized reconstruction of packaging hexamer P4 from equatorial region of transcribing double-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52385:
Localized reconstruction consensus map of minor protein P7 from transcribing particles of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52386:
Localized reconstruction of polymerase P2 from transcribing double-layered particle of bacteriophage phi6 in stage A1
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52387:
Localized reconstruction of polymerase P2 from transcribing double-layered particle of bacteriophage phi6 in stage A2
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52388:
Localized reconstruction of polymerase P2 from transcribing double-layered particle of bacteriophage phi6 in stage A3
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52389:
Localized reconstruction of polymerase P2 from transcribing single-layered particle of bacteriophage phi6 in stage B
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52390:
Localized reconstruction of polymerase P2 from transcribing single-layered particle of bacteriophage phi6 in stage C
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52391:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 1
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52392:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 2
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52393:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 3
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52394:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 4
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52395:
Transcription-arrested double-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52396:
Transcription-arrested single-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52397:
Transcription-arrested double-layered particle of bacteriophage phi6 reconstructed with D3 symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52398:
Transcription-arrested single-layered particle of bacteriophage phi6 reconstructed with D3 symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52399:
Localized reconstruction of asymmetric unit from transcribing double-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52400:
Localized reconstruction of asymmetric unit from transcribing single-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52401:
Localized reconstruction of asymmetric unit from transcribing single-layered particle of bacteriophage phi6 in an over-expanded state
Method: single particle / : Ilca SL, Huiskonen JT

PDB-9htw:
Minor protein P7 dimer from transcribing particles of bacteriophage phi6
Method: single particle / : Kumpula EP, Huiskonen JT

PDB-9hu4:
Asymmetric unit from transcribing double-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

PDB-9hu5:
Asymmetric unit from transcribing single-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Kumpula EP, Huiskonen JT

PDB-9hu6:
Asymmetric unit from transcribing single-layered particle of bacteriophage phi6 in an over-expanded state
Method: single particle / : Ilca SL, Kumpula EP, Huiskonen JT

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more