[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,514 items for (author: jose & j)

EMDB-72125:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-72280:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-74405:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q1e:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q6o:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9zlk:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-58124:
In situ subtomogram average of a ribosome bound to ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen (mNeon-KDEL)
Method: subtomogram averaging / : Carter SD, Jensen GJ, Freyberg Z

EMDB-73618:
Cryo-EM structure of the core region of cIL-U1A-Fab1R-PGA1-sfFab quaternary complex at 2.9 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-73655:
The global map of cIL-U1A-Fab1R-PGA1-sfFab18 quaternary complex
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-73840:
Cryo-EM structure of the open state of cIL RNA region at 4.3 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-75812:
The composite map of cIL-U1A-Fab1R-PGA1-sfFab18 quaternary complex
Method: single particle / : Filippova EV, Kossiakoff AA

PDB-9yxv:
Cryo-EM structure of the core region of cIL-U1A-Fab1R-PGA1-sfFab quaternary complex at 2.9 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

PDB-9z6i:
Cryo-EM structure of the open state of cIL RNA at 4.3 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-56664:
Cryo-ET of IAV (WSN-M1-Udorn) supernatant
Method: electron tomography / : Peterl S, Chlanda P

EMDB-56667:
Cryo-ET of IAV (WSN-M1-Udorn) pellet
Method: electron tomography / : Peterl S, Chlanda P

EMDB-56668:
Cryo-ET of IAV (WSN-M1-Udorn) unfractionated
Method: electron tomography / : Peterl S, Chlanda P

EMDB-71953:
ATTR cardiac amyloid fibrils apex1
Method: helical / : Schaefer JH, Lander GC

EMDB-71960:
ATTR cardiac amyloid fibrils apex2
Method: helical / : Schaefer JH, Lander GC

EMDB-71962:
ATTR V122I cardiac amyloid fibrils
Method: helical / : Schaefer JH, Lander GC

EMDB-73312:
ATTR Collagen VI Cofibrils
Method: single particle / : Schaefer JH, Lander GC

EMDB-73313:
Human Collagen VI microfibril
Method: single particle / : Schaefer JH, Lander GC

PDB-9px6:
ATTR cardiac amyloid fibrils apex1
Method: helical / : Schaefer JH, Lander GC

PDB-9px7:
ATTR cardiac amyloid fibrils apex2
Method: helical / : Schaefer JH, Lander GC

PDB-9px9:
ATTR V122I cardiac amyloid fibrils
Method: helical / : Schaefer JH, Lander GC

EMDB-71307:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-71308:
eN49P7-FRv1-23 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9p6e:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9p6g:
eN49P7-FRv1-23 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-53993:
Polar sheathed flagella with reduced flagellins in Vibrio alginolyticus
Method: electron tomography / : Qin K, Einenkel R, Zhao W, Atherton J, Erhardt M, Bergeron JRC

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-53912:
Unsheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Zhao W, Erhardt M, Bergeron JRC

EMDB-53917:
Sheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Erhardt M, Bergeron JRC

EMDB-53992:
Polar sheathed flagella tips in Vibrio alginolyticus
Method: electron tomography / : Qin K, Einenkel R, Zhao W, Atherton J, Erhardt M, Bergeron JRC

PDB-9rcb:
Unsheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Zhao W, Erhardt M, Bergeron JRC

PDB-9rcd:
Sheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Erhardt M, Bergeron JRC

EMDB-73509:
Structure of the Plasmodium falciparum 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

EMDB-73510:
Structure of the human 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

PDB-9yuy:
Structure of the Plasmodium falciparum 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

PDB-9yuz:
Structure of the human 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

EMDB-48534:
Cryo-EM of MgtA in the E2-P state with bound Mg2+ at 3.1 angstrom resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9mqm:
Cryo-EM of MgtA in the E2-P state with bound Mg2+ at 3.1 angstrom resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-49450:
Cryo-EM structure of an MgtA tetramer in E2-P and E1-like states
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9nhz:
Cryo-EM structure of an MgtA tetramer in E2-P and E1-like states
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-55141:
Human DNA polymerase epsilon bound to DNA blunt end
Method: single particle / : Roske JJ, Yeeles JTP

EMDB-55724:
Cryo-EM structure of Pol epsilon-PCNA reconstituted on a DNA scaffold with 5'-overhangs on either side of the double-stranded segment
Method: single particle / : Roske JJ, Yeeles JTP

PDB-9sri:
Human DNA polymerase epsilon bound to DNA blunt end
Method: single particle / : Roske JJ, Yeeles JTP

EMDB-54181:
Consensus map of heptameric Rep40-dsDNA (ITR) in presence of ATPyS
Method: single particle / : Rouse SL, Bubeck D, Barritt JD, Xu V, Wake M

EMDB-54182:
Focused map of 3 subunits of Rep40 +dsDNA (ITR) in complex with ATPgS
Method: single particle / : Rouse SL, Bubeck D, Barritt JD, Xu V, Wake M

EMDB-54183:
Focused map of 4 subunits of heptameric Rep40-dsDNA (ITR) in complex with ATPgS
Method: single particle / : Rouse SL, Bubeck D, Barritt JD, Xu V, Wake M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more