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Yorodumi Search

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Showing 1 - 50 of 121 items for (author: izumi & y)

EMDB-37501:
mouse TMEM63b in LMNG-CHS micelle
Method: single particle / : Miyata Y, Takahashi K, Lee Y, Sultan CS, Kuribayashi R, Takahashi M, Hata K, Bamba T, Izumi Y, Liu K, Uemura T, Nomura N, Iwata S, Nagata S, Nishizawa T, Segawa K

EMDB-37502:
mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab
Method: single particle / : Miyata Y, Takahashi K, Lee Y, Sultan CS, Kuribayashi R, Takahashi M, Hata K, Bamba T, Izumi Y, Liu K, Uemura T, Nomura N, Iwata S, Nagata S, Nishizawa T, Segawa K

PDB-8wg3:
mouse TMEM63b in LMNG-CHS micelle
Method: single particle / : Miyata Y, Takahashi K, Lee Y, Sultan CS, Kuribayashi R, Takahashi M, Hata K, Bamba T, Izumi Y, Liu K, Uemura T, Nomura N, Iwata S, Nagata S, Nishizawa T, Segawa K

PDB-8wg4:
mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab
Method: single particle / : Miyata Y, Takahashi K, Lee Y, Sultan CS, Kuribayashi R, Takahashi M, Hata K, Bamba T, Izumi Y, Liu K, Uemura T, Nomura N, Iwata S, Nagata S, Nishizawa T, Segawa K

EMDB-39482:
mouse proteasome 20S subunit in complex with compound 1
Method: single particle / : Kashima A, Arai Y

EMDB-39565:
canine immunoproteasome 20S subunit in complex with compound 2
Method: single particle / : Kashima A, Arai Y

EMDB-39600:
canine immunoproteasome 20S subunit in complex with compound 1
Method: single particle / : Kashima A, Arai Y

EMDB-39612:
canine immunoproteasome 20S subunit in complex with compound 1
Method: single particle / : Kashima A, Arai Y

PDB-8ypk:
mouse proteasome 20S subunit in complex with compound 1
Method: single particle / : Kashima A, Arai Y

PDB-8ysx:
canine immunoproteasome 20S subunit in complex with compound 2
Method: single particle / : Kashima A, Arai Y

PDB-8yvg:
canine immunoproteasome 20S subunit in complex with compound 1
Method: single particle / : Kashima A, Arai Y

PDB-8yvp:
canine immunoproteasome 20S subunit in complex with compound 1
Method: single particle / : Kashima A, Arai Y

EMDB-37827:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37828:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37829:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37830:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt6:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt7:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt8:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt9:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-34823:
Structure of human SGLT2-MAP17 complex with Phlorizin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

PDB-8hin:
Structure of human SGLT2-MAP17 complex with Phlorizin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

EMDB-34705:
Structure of human SGLT2-MAP17 complex with Dapagliflozin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

EMDB-34737:
Structure of human SGLT2-MAP17 complex with Sotagliflozin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

PDB-8hez:
Structure of human SGLT2-MAP17 complex with Dapagliflozin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

PDB-8hg7:
Structure of human SGLT2-MAP17 complex with Sotagliflozin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

EMDB-34673:
Structure of human SGLT2-MAP17 complex with Canagliflozin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

PDB-8hdh:
Structure of human SGLT2-MAP17 complex with Canagliflozin
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

EMDB-34610:
Structure of human SGLT2-MAP17 complex with TA1887
Method: single particle / : Hiraizumi M, Kishida H, Masahiro I, Nureki O

PDB-8hb0:
Structure of human SGLT2-MAP17 complex with TA1887
Method: single particle / : Hiraizumi M, Kishida H, Miyaguchi I, Nureki O

EMDB-40062:
Kalium channelrhodopsin 1 from Hyphochytrium catenoides (HcKCR1) embedded in peptidisc
Method: single particle / : Morizumi T, Kim K, Li H, Spudich JL, Ernst OP

EMDB-40063:
Cation channelrhodopsin from Hyphochytrium catenoides (HcCCR) embedded in peptidisc
Method: single particle / : Morizumi T, Kim K, Li H, Spudich JL, Ernst OP

PDB-8gi8:
Kalium channelrhodopsin 1 from Hyphochytrium catenoides (HcKCR1) embedded in peptidisc
Method: single particle / : Morizumi T, Kim K, Li H, Spudich JL, Ernst OP

PDB-8gi9:
Cation channelrhodopsin from Hyphochytrium catenoides (HcCCR) embedded in peptidisc
Method: single particle / : Morizumi T, Kim K, Li H, Spudich JL, Ernst OP

EMDB-28228:
SARS-CoV-2 spike glycoprotein in complex with the ICO-hu23 neutralizing antibody Fab fragment
Method: single particle / : Yee AW, Morizumi T, Kim K, Kuo A, Ernst OP

PDB-8elj:
SARS-CoV-2 spike glycoprotein in complex with the ICO-hu23 neutralizing antibody Fab fragment
Method: single particle / : Yee AW, Morizumi T, Kim K, Kuo A, Ernst OP

EMDB-13981:
Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
Method: single particle / : Singh V, Itoh Y, Andrell J, Aibara S, Amunts A

PDB-7qi5:
Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
Method: single particle / : Singh V, Itoh Y, Amunts A

EMDB-35622:
SARS-CoV-2 XBB.1 spike glycoprotein (closed-1 state)
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-35623:
SARS-CoV-2 XBB.1 spike glycoprotein (closed-2 state)
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-35624:
SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 (1-up state)
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-35625:
SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 (2-up state)
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-35626:
SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 focused on RBD-ACE2 interface
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

PDB-8ios:
Structure of the SARS-CoV-2 XBB.1 spike glycoprotein (closed-1 state)
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

PDB-8iot:
Structure of the SARS-CoV-2 XBB.1 spike glycoprotein (closed-2 state)
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

PDB-8iou:
Structure of SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 (1-up state)
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

PDB-8iov:
Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2
Method: single particle / : Anraku Y, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Maenaka K, Hashiguchi T

EMDB-13982:
Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution
Method: single particle / : Singh V, Itoh Y, Amunts A, Aibara S

PDB-7qi6:
Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution
Method: single particle / : Singh V, Itoh Y, Amunts A

EMDB-29357:
Human IMPDH2 mutant - L245P, treated with ATP, IMP, and NAD+; filament assembly interface reconstruction
Method: single particle / : O'Neill AG, Kollman JM

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

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