[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 402 items for (author: horn & m)

EMDB-52653:
Glutamate transporter homologue GltPh mutant P206R in Complex with L-Aspartate and Sodium Ions in Salipro
Method: single particle / : Horn G, Overa C, Fu L, Urbansky K, Madej MG, Ziegler C

PDB-9i6d:
Glutamate transporter homologue GltPh mutant P206R in Complex with L-Aspartate and Sodium Ions in Salipro
Method: single particle / : Horn G, Overa C, Fu L, Urbansky K, Madej MG, Ziegler C

EMDB-52643:
Upregulated state of BetP in potassium
Method: single particle / : Urbansky K, Fu L, Madej MG, Horn G, Ziegler C

PDB-9i5z:
Upregulated state of BetP in potassium
Method: single particle / : Urbansky K, Fu L, Madej MG, Horn G, Ziegler C

EMDB-52657:
EAAT1 thermostabilized mutant in Complex with L-Asp, Metal Ions, and the allosteric inhibitor UCPH101 in Salipro
Method: single particle / : Horn G, Fu L, Madej MG, Ziegler C

PDB-9i7m:
EAAT1 thermostabilized mutant in Complex with L-Asp, Metal Ions, and the allosteric inhibitor UCPH101 in Salipro
Method: single particle / : Horn G, Fu L, Madej MG, Ziegler C

EMDB-52663:
EAAT1 thermostabilized mutant in Complex with Rubidium, and the allosteric inhibitor UCPH101 in DDS/CHS
Method: single particle / : Horn G, Fu L, Madej MG, Ziegler C

PDB-9i7v:
EAAT1 thermostabilized mutant in Complex with Rubidium, and the allosteric inhibitor UCPH101 in DDS/CHS
Method: single particle / : Horn G, Fu L, Madej MG, Ziegler C

EMDB-54793:
Structure of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54794:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-54795:
Cryo-EM map of focus refined ASB9-Elob/C-CKB bound to Nedd8-CUL5-RBX2-ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54892:
consensus map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB
Method: single particle / : Schulman BA, Du J

EMDB-54893:
Focus refined map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB, focus refined on ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54933:
Consensus Map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54934:
Focus refined map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdx:
Structure of RBR binding E2 variant crosslinked with NEDD8-CUL5-RBX2 bound ARIH2 and Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdy:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-67283:
C1 Symmetry of DNA tesseract
Method: single particle / : Shiu SCC

EMDB-67284:
Octahedral Symmetry of DNA Tesseract
Method: single particle / : Shiu SCC

EMDB-47174:
Cryo-EM Structure of CRBN:dHTC1:ENL YEATS
Method: single particle / : Cheong H, Hunkeler M, Fischer ES

PDB-9dur:
Cryo-EM Structure of CRBN:dHTC1:ENL YEATS
Method: single particle / : Cheong H, Hunkeler M, Fischer ES

PDB-9i0g:
CryoEM structure of holo-GmNifEN
Method: single particle / : Paya Tormo L, Nguyen TQ, Fyfe C, Basbous H, Dobrzynska K, Echavarri-Erasun C, Martin L, Caserta G, Legrand P, Thorn A, Amara P, Schoehn G, Cherrier MV, Rubio LM, Nicolet Y

PDB-9i0h:
CryoEM structure of transit-GmNifEN
Method: single particle / : Paya Tormo L, Nguyen TQ, Fyfe C, Basbous H, Dobrzynska K, Echavarri-Erasun C, Martin L, Caserta G, Legrand P, Thorn A, Amara P, Schoehn G, Cherrier MV, Rubio LM, Nicolet Y

EMDB-51074:
TRPC5 in complex with photoswitch E-AzHC
Method: single particle / : Porav SA, Bon R, Muench S

EMDB-51076:
TRPC5 in complex with photoswitch Z-AzHC
Method: single particle / : Porav SA, Bon R, Muench S

EMDB-50850:
TRPC4 in complex with E-AzPico
Method: single particle / : Vinayagam D, Raunser S

EMDB-50851:
TRPC4 in complex with Z-AzPico
Method: single particle / : Vinayagam D, Raunser S

PDB-9fxl:
TRPC4 in complex with E-AzPico
Method: single particle / : Vinayagam D, Raunser S

PDB-9fxm:
TRPC4 in complex with Z-AzPico
Method: single particle / : Vinayagam D, Raunser S

EMDB-49208:
Consensus map of the autoinhibitory unliganded CD163 trimer (map A)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49209:
Local map of the autoinhibitory unliganded CD163 trimer (map B)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49210:
Local map of the autoinhibitory unliganded CD163 trimer (map C)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49211:
Local map of the autoinhibitory unliganded CD163 trimer (map D)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49212:
Local map of the autoinhibitory unliganded CD163 trimer (map E)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49213:
Composite map of the autoinhibitory unliganded CD163 trimer (map F)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49214:
Consensus map of the CD163/Hp(1-1)Hb complex (Map G)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49215:
Local map of the CD163/Hp(1-1)Hb complex (Map H)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49216:
Local map of the CD163/Hp(1-1)Hb complex (Map I)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49217:
Local map of the CD163/Hp(1-1)Hb complex (Map J)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49218:
Composite map of the CD163/Hp(1-1)Hb complex (Map K)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49219:
Consensus map of the CD163/HpSPHb complex (Map L)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49220:
Local map of the CD163/HpSPHb complex (Map M)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49221:
Composite map of the CD163/HpSPHb complex (Map M)
Method: single particle / : Huang CS, White JBR, Degtjarik O

PDB-9nb5:
Cryo-EM structure of the autoinhibitory CD163 trimer
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

PDB-9nb6:
Cryo-EM structure of the CD163/Hp(1-1)Hb complex
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

PDB-9nb8:
Cryo-EM structure of the CD163/HpSPHb complex
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

EMDB-46892:
Structure of SARS-CoV-2 spike in complex with antibody Fab COVIC-154
Method: single particle / : Yu X, Saphire EO

PDB-9dhy:
Structure of SARS-CoV-2 spike in complex with antibody Fab COVIC-154
Method: single particle / : Yu X, Saphire EO

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more