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Showing 1 - 50 of 5,091 items for (author: hong & k)

EMDB-73703:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), consensus map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73704:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), left wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73705:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), right wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73707:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex (RECC), tRNA focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-69908:
Cryo-EM structure of TRP melastatin channel in the desensitized state, with icilin (10min)
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69909:
Cryo-EM structure of TRP melastatin channel with icilin (10min)
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69929:
Cryo-EM structure of TRP melastatin channel in the putative intermediate 3, without CHS
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69930:
Cryo-EM structure of TRP melastatin channel in the putative desensitized state, without CHS
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69932:
Cryo-EM structure of TRP melastatin channel in the putative intermediate 2 state, with EGTA
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69933:
Cryo-EM structure of TRP melastatin channel in the putative twofold intermediate 1 state, with EGTA
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69934:
Cryo-EM structure of TRP melastatin channel in the putative desensitized state, with EGTA
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-80306:
Cryo-EM Structure of PLPP3
Method: single particle / : Long T, Wu Y

EMDB-81156:
Structure of PLPP3 prepared in the presence of EDTA
Method: single particle / : Long T

PDB-25qp:
Cryo-EM Structure of PLPP3
Method: single particle / : Long T, Wu Y

EMDB-73275:
Cryo-EM structure of a preformed dimer of the C. elegans EGFR (LET-23) extracellular region
Method: single particle / : Zuo Y, Han L, Ferguson KM

EMDB-73276:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3
Method: single particle / : Zuo Y, Han L, Ferguson KM

EMDB-73277:
Cryo-EM structure of an inactive dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3.
Method: single particle / : Zuo Y, Han L, Ferguson KM

EMDB-73278:
Cryo-EM structure of a weak dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

EMDB-73279:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion bound to LIN-3.
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

PDB-9yor:
Cryo-EM structure of a preformed dimer of the C. elegans EGFR (LET-23) extracellular region
Method: single particle / : Zuo Y, Han L, Ferguson KM

PDB-9yos:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3
Method: single particle / : Zuo Y, Han L, Ferguson KM

PDB-9yot:
Cryo-EM structure of an inactive dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3.
Method: single particle / : Zuo Y, Han L, Ferguson KM

PDB-9you:
Cryo-EM structure of a weak dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

PDB-9yov:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion bound to LIN-3.
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

EMDB-77477:
apo-bmCCAN consensus refinement
Method: single particle / : Yatskevich S, Ciferri C

EMDB-66239:
Subtomogram averaged A/T, P state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66240:
Subtomogram averaged A/T, P, E state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66241:
Subtomogram averaged A/T, P, Z state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66242:
Subtomogram averaged A, P state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66243:
Subtomogram averaged A, P, E state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66244:
Subtomogram averaged A, P, Z state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66245:
Subtomogram averaged P, E state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66246:
Subtomogram averaged P state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66247:
Subtomogram averaged eEF2, E state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66248:
Subtomogram averaged A/P, P/E state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66249:
Subtomogram averaged A/P, P/E, eEF2 state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66250:
Subtomogram averaged A/A, P/E state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66251:
Subtomogram averaged eEF2, eIF5A, SERBP1 state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66252:
Subtomogram averaged Disome 1 state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66253:
Subtomogram averaged Disome 2 state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66254:
Subtomogram averaged Disome 1 state of the 80S ribosome in rat hippocampal neuron
Method: subtomogram averaging / : Wang X, Chen C, Guo Q

EMDB-66255:
in situ idle-1 state of the 80S ribosome in rat hippocampal neuron
Method: single particle / : Wang X, Chen C, Guo Q

EMDB-66256:
in situ idle-2 state of the 80S ribosome in rat hippocampal neuron
Method: single particle / : Wang X, Chen C, Guo Q

EMDB-73392:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

EMDB-73457:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

PDB-9ysg:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

PDB-9ytc:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

EMDB-66217:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-66218:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-72559:
Consensus map of Csm/AcrIIIA2/enolase 3:2 complex
Method: single particle / : Goswami HN, Li H

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

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