[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 16,885 items for (author: he & ll)

EMDB-55083:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-55091:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spf:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spi:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-70159:
Cryo-EM structure of SHOC2-KRAS-PP1CA (SKP) complex
Method: single particle / : Finci LI, Bonsor DA, Simanshu DK

PDB-9o65:
Cryo-EM structure of SHOC2-KRAS-PP1CA (SKP) complex
Method: single particle / : Finci LI, Bonsor DA, Simanshu DK

EMDB-70140:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70141:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5d:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5e:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-52020:
Cryo-EM consensus map of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52021:
Cryo-EM focused refined map of the canine distemper virus dimer II region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52023:
Cryo-EM focused refined map of the canine distemper virus dimer I region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52024:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

PDB-9hbp:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-63614:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Z, Hauser AS, Carlsson J

PDB-9m42:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Zj, Hauser AS, Carlsson J

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-47570:
DH726-1 Fab bound to hemagglutinin from influenza A/Solomon Islands/3/2006
Method: single particle / : Finney J, Harrison SC, Walsh Jr RM, Kelsoe G

EMDB-48407:
E. coli GroEL bound with ATP and PBZ1587 inhibitor
Method: single particle / : Johnson SM, Chen Q

EMDB-48408:
E. coli SR1 single-ring GroEL oligomer
Method: single particle / : Johnson SM, Chen Q

EMDB-48409:
E. coli SR1 single-ring GroEL templated into pseudo-double-ring complex with PBZ1587 inhibitor
Method: single particle / : Johnson SM, Chen Q

EMDB-48410:
E. coli SR1 single-ring GroEL oligomer
Method: single particle / : Johnson SM, Chen Q

EMDB-48411:
E. coli GroES-GroEL-GroES football complex
Method: single particle / : Johnson SM, Chen Q

EMDB-47503:
Human ASIC1a at pH 8.5 with domain-swapped transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47504:
Human ASIC1a at pH 7.5 with domain-swapped transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47505:
Human ASIC1a at pH 7.5 with partial transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47506:
Human ASIC1a at pH 7.5 with linear transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47507:
Human ASIC1a at pH 6.5 with linear transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47508:
Human ASIC1a at pH 5.7 with domain-swapped transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47509:
Human ASIC1a at pH 5.7 with linear transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47510:
Human ASIC1a at pH 5.7 with rotated, domain-swapped transmembrane domain
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47511:
Human ASIC1a at pH 7.5 in complex with MitTx
Method: single particle / : Hartfield KA, Yoshioka C, Cahill J, Baconguis I

EMDB-47512:
Human ASIC1a at pH 6.5 in complex with MitTx
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-47513:
Human ASIC1a at pH 8.5, T26V mutation
Method: single particle / : Hartfield KA, Cahill J, Baconguis I

EMDB-52492:
Cryo-EM structure of human UBR4/KCMF1/CALM1 (N-term focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52511:
Cryo-EM structure of the C. elegans UBR4/KCMF1 complex (side focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52515:
Cryo-EM structure of the C. elegans UBR4/KCMF1 complex (N-term focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-56129:
Octameric C. elegans BORC, containing BORCS5, BORCS6, BORCS7, BORCS8, KXD1 and the shared BORC and BLoC-1 subunits, BLOC1S1, BLOC1S2 and Snapin
Method: single particle / : Amann SJ, de Araujo MEG, Grishkovskaya I, Huber LA, Haselbach D

EMDB-62901:
PSI trimer of Synechocystis sp. PCC 6803
Method: single particle / : Shen LL, Han GY

EMDB-56149:
L. pneumophila 3-methylcrotonyl-CoA carboxylase A1B6
Method: single particle / : Meir A, Durie C, Somarathne R, Shrestha R, Zehra M, Brodeur C, Bhella D, Lai WC

PDB-9tqg:
L. pneumophila 3-methylcrotonyl-CoA carboxylase A1B6
Method: single particle / : Meir A, Durie C, Somarathne R, Shrestha R, Zehra M, Brodeur C, Bhella D, Lai WC

EMDB-52860:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52861:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52879:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52912:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52958:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

EMDB-53025:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

EMDB-53026:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-53237:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more