[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 831 items for (author: hay & id)

EMDB-45440:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

PDB-9cca:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

EMDB-48537:
A8 Fab in complex with CD97
Method: single particle / : Hattori T, Bang I, Fang M, Koide S

PDB-9mqr:
A8 Fab in complex with CD97
Method: single particle / : Hattori T, Bang I, Fang M, Koide S

EMDB-45474:
Structure of MORC2 PD mutant binding to AMP-PNP
Method: single particle / : Tan W, Shakeel S

EMDB-45475:
MORC2 ATPase dead mutant - S87A
Method: single particle / : Tan W, Shakeel S

EMDB-45476:
MORC2 PD mutant with DNA
Method: single particle / : Tan W, Shakeel S

EMDB-45477:
MORC2 ATPase structure
Method: single particle / : Tan W, Shakeel S

EMDB-45478:
MORC2 ATPase with DNA
Method: single particle / : Tan W, Shakeel S

PDB-9cdf:
Structure of MORC2 PD mutant binding to AMP-PNP
Method: single particle / : Tan W, Shakeel S

PDB-9cdg:
MORC2 ATPase dead mutant - S87A
Method: single particle / : Tan W, Shakeel S

PDB-9cdh:
MORC2 PD mutant with DNA
Method: single particle / : Tan W, Shakeel S

PDB-9cdi:
MORC2 ATPase structure
Method: single particle / : Tan W, Shakeel S

PDB-9cdj:
MORC2 ATPase with DNA
Method: single particle / : Tan W, Shakeel S

EMDB-19790:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

EMDB-19811:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

PDB-8s82:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

PDB-8s8p:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

EMDB-47972:
VIP3Cb1 Toxin structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

EMDB-47974:
VIP3Cb1 Protoxin Structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

PDB-9efg:
VIP3Cb1 Toxin structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

PDB-9efi:
VIP3Cb1 Protoxin Structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

EMDB-61037:
Cryo-EM structure of CasLambda2-crRNA binary complex
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61038:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the incompetent state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61039:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the intermediate state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61040:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the NTS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61041:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the TS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izm:
Cryo-EM structure of CasLambda2-crRNA binary complex
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izp:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the incompetent state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izq:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the intermediate state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izr:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the NTS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izs:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the TS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-44380:
Prefusion F glycoprotein ectodomain of Nipah virus ectodomain in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

PDB-9b9e:
Prefusion F glycoprotein ectodomain of Nipah virus ectodomain in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-46604:
BG505 DS-SOSIP.664 apo structure from the CH103 KN cryo-EM dataset
Method: single particle / : Parsons RJ, Acharya P

EMDB-46605:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 KN Fab bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46606:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 KN Fabs bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46613:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 Fab bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46614:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 Fabs bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7g:
BG505 DS-SOSIP.664 apo structure from the CH103 KN cryo-EM dataset
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7h:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 KN Fab bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7i:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 KN Fabs bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7o:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 Fab bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7p:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 Fabs bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-60476:
Cryo-EM structure of the Cas13a-rAcrVIA1 complex
Method: single particle / : Zhang JT, Li YL, Jia N

PDB-8zty:
Cryo-EM structure of the Cas13a-rAcrVIA1 complex
Method: single particle / : Zhang JT, Li YL, Jia N

EMDB-51375:
BCL7A and BAF47 in a nucleosome bound state
Method: single particle / : Martin F, Bergamin E

EMDB-51376:
BCL7A and BAF47 in a nucleosome bound state
Method: single particle / : Martin F, Bergamin E

EMDB-52975:
Structure of the nucleosome-bound human BCL7A
Method: single particle / : Martin F, Bergamin E

PDB-9qaj:
Structure of the nucleosome-bound human BCL7A
Method: single particle / : Martin F, Bergamin E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more