[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 31,281 items for (author: han & w)

EMDB-74054:
Rhoptry secretory apparatus of Toxoplasma gondii conformation 2
Method: subtomogram averaging / : Morley L, Chang YW

EMDB-74055:
Rhoptry secretory apparatus of Toxoplasma gondii conformation 1
Method: subtomogram averaging / : Morley L, Chang YW

EMDB-74069:
Rhoptry secretory apparatus of Toxoplasma gondii conformation 4
Method: subtomogram averaging / : Morley L, Chang YW

EMDB-74070:
Rhoptry secretory apparatus of Toxoplasma gondii conformation 3
Method: subtomogram averaging / : Morley L, Chang YW

EMDB-59533:
Immune complex comprising the HRSV preF trimer (SC-DM) and the monoclonal antibody Lor69 - Obtained by cryo-EM
Method: single particle / : Ols S, Cerveira RA, Borst AJ, Bermudez-Mendez E, Gegenfurtner F, Eray E, Weidle C, Miranda MC, Peng Z, Carr KD, Skotheim R, Kochmann J, Brunette N, Lenart K, Hanke L, Karlsson Hedestam GB, Perez L, Antanasijevic A, King NP, Lore K

PDB-33sd:
Immune complex comprising the HRSV preF trimer (SC-DM) and the monoclonal antibody Lor69 - Obtained by cryo-EM
Method: single particle / : Ols S, Cerveira RA, Borst AJ, Bermudez-Mendez E, Gegenfurtner F, Eray E, Weidle C, Miranda MC, Peng Z, Carr KD, Skotheim R, Kochmann J, Brunette N, Lenart K, Hanke L, Karlsson Hedestam GB, Perez L, Antanasijevic A, King NP, Lore K

EMDB-67441:
Structure of Human Aspartate--tRNA ligase 3-154 with linker and FC : ATYR0101
Method: single particle / : Nangle L, Tian H, Fung CP

PDB-21aa:
Structure of Human Aspartate--tRNA ligase 3-154 with linker and FC : ATYR0101
Method: single particle / : Nangle L, Tian H, Fung CP

EMDB-76826:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1) in the apo state
Method: single particle / : Ren Z, Lee SY

EMDB-76827:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), state 1 (post UDP hydrolysis) after 5 min reaction
Method: single particle / : Ren Z, Lee SY

EMDB-76828:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), state 2 (pre-translocation) after 5 min reaction
Method: single particle / : Ren Z, Lee SY

EMDB-76829:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), state 3 (post-translocation) after 5 min reaction
Method: single particle / : Ren Z, Lee SY

EMDB-76830:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), bound to diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-76831:
Candida albicans Chitin synthase 1 (CaChs1) bound to UDP-GlcNAc and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-76832:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-2), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-76833:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-3), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-76834:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-4), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-76835:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-5), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-76836:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-6), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-76837:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-7), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xf:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1) in the apo state
Method: single particle / : Ren Z, Lee SY

PDB-12xg:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), state 1 (post UDP hydrolysis) after 5 min reaction
Method: single particle / : Ren Z, Lee SY

PDB-12xh:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), state 2 (pre-translocation) after 5 min reaction
Method: single particle / : Ren Z, Lee SY

PDB-12xi:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), state 3 (post-translocation) after 5 min reaction
Method: single particle / : Ren Z, Lee SY

PDB-12xj:
Structure of Class II chitin synthase, Chs1, from Candida albicans (CaChs1), bound to diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xk:
Candida albicans Chitin synthase 1 (CaChs1) bound to UDP-GlcNAc and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xl:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-2), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xm:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-3), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xn:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-4), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xo:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-5), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xp:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-6), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

PDB-12xq:
Candida albicans Chitin synthase 1 (CaChs1) intermediate state (DA-7), bound to UDP and diynyl arylamine (DA, aka RO-09-3143)
Method: single particle / : Ren Z, Lee SY

EMDB-81712:
Cryo-EM structure of hydrogenase-2 in complex with L1 (left)
Method: single particle / : Zhang N, Huang Y, Zhang L

EMDB-81713:
Cryo-EM structure of hydrogenase-2 in complex with L1 (right)
Method: single particle / : Zhang N, Huang Y, Zhang L

PDB-28fs:
Cryo-EM structure of hydrogenase-2 in complex with L1 (left)
Method: single particle / : Zhang N, Huang Y, Zhang L

PDB-28fu:
Cryo-EM structure of hydrogenase-2 in complex with L1 (right)
Method: single particle / : Zhang N, Huang Y, Zhang L

EMDB-57068:
Cryo-EM structure of human DHX9 in complex with ATX-968 and ADP.
Method: single particle / : Hallett ST, Silva STN, Le Bihan Y, Van Montfort R

PDB-29by:
Cryo-EM structure of human DHX9 in complex with ATX-968 and ADP.
Method: single particle / : Hallett ST, Silva STN, Le Bihan Y, Van Montfort R

EMDB-78435:
Plasmodium falciparum 17-PF subpellicular microtubule
Method: single particle / : Zeng J, Zhang R

EMDB-78436:
Plasmodium falciparum 18-PF subpellicular microtubule
Method: single particle / : Zeng J, Zhang R

EMDB-78437:
Plasmodium falciparum 17-PF subpellicular microtubule associated with human hemoglobin (local refined map)
Method: single particle / : Zeng J, Zhang R

EMDB-78438:
Plasmodium falciparum 17-PF subpellicular microtubule associated with human hemoglobin
Method: single particle / : Zeng J, Zhang R

EMDB-68871:
Cryo-EM structure of the MRGPRX4-miniGsq complex bound to the agonist dexamethasone phosphate (DEX-P)
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

PDB-23cv:
Cryo-EM structure of the MRGPRX4-miniGsq complex bound to the agonist dexamethasone phosphate (DEX-P)
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

EMDB-68873:
Cryo-EM structure of the MRGPRX4-miniGsq complex bound to the inverse agonist cmpd54-4
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

PDB-23cx:
Cryo-EM structure of the MRGPRX4-miniGsq complex bound to the inverse agonist cmpd54-4
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

EMDB-68868:
Cryo-EM structure of the MRGPRX4-miniGsq complex in the apo state
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

PDB-23cs:
Cryo-EM structure of the MRGPRX4-miniGsq complex in the apo state
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

EMDB-68872:
Cryo-EM structure of the MRGPRX4-miniGsq complex bound to the agonist dexamethasone phosphate (DEX-P),local
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

PDB-23cw:
Cryo-EM structure of the MRGPRX4-miniGsq complex bound to the agonist dexamethasone phosphate (DEX-P),local
Method: single particle / : Cao C, Wang C, Zhang M, Ji Z

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more