[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 24,395 items for (author: han & p)


EMDB Unreleased entry

EMDB-56552:
CLASS-1_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A


EMDB Unreleased entry

EMDB-56554:
CLASS-2_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A


EMDB Unreleased entry

EMDB-56555:
CLASS-5_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A


EMDB Unreleased entry

EMDB-56556:
CLASS-6_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A


EMDB Unreleased entry

EMDB-56557:
CLASS-7_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A


EMDB Unreleased entry

EMDB-57250:
Cryo-EM consensus map of lm32cs1c1 m6 overexpression : class 10
Method: single particle / : Rajan KS, Yoanth A


EMDB Unreleased entry

EMDB-55789:
Structure of vaccine candidate AHSV-4 VP2 DI-mi3 nanoparticle
Method: single particle / : Martinez-Castillo A, Aebischer A, Fu L, Breard E, Zientara S, Kortekaas J, Beer M, Abrescia NGA


EMDB Unreleased entry

EMDB-55790:
African Horse Sickness Virus serotype 4 VP2 homotrimer
Method: single particle / : Martinez-Castillo A, Aebischer A, Fu L, Breard E, Zientara S, Kortekaas J, Beer M, Abrescia NGA

PDB-9tcc:
African Horse Sickness Virus serotype 4 VP2 homotrimer
Method: single particle / : Martinez-Castillo A, Aebischer A, Fu L, Breard E, Zientara S, Kortekaas J, Beer M, Abrescia NGA


EMDB Unreleased entry

EMDB-66504:
Phage T4 neck in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66505:
Phage T4 sheath in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66506:
Phage T4 inner baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66507:
Phage T4 peripheral baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66508:
Phage T4 tip of the tail tube in post-tail-contraction state (genome-empty particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66675:
Phage T4 protruding part of the tail tube in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3o:
Phage T4 neck in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3p:
Phage T4 sheath in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3q:
Phage T4 inner baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3r:
Phage T4 peripheral baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3s:
Phage T4 tip of the tail tube in post-tail-contraction state (genome-empty particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9xa3:
Phage T4 protruding part of the tail tube in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-48061:
Octopus ribosome, hybrid 80S
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

PDB-9eho:
Octopus ribosome, hybrid 80S
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY


EMDB Unreleased entry

EMDB-75346:
Membrane protein solubilization and structure determination using de novo-designed amphipathic proteins
Method: single particle / : Borst AJ, Weidle C


EMDB Unreleased entry

EMDB-75350:
WRAP-TP0698
Method: single particle / : Borst AJ


EMDB Unreleased entry

EMDB-68782:
In situ cryo sub-tomogram average of the ciliary axoneme from Rgs22 knockout mouse ependymal progenitor cells
Method: subtomogram averaging / : Ye-Jun P


EMDB Unreleased entry

EMDB-55135:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55136:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55137:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55139:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55636:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sra:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srb:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9src:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sre:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9t7h:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-67024:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 2).
Method: helical / : Ma BY, Yao YX, Li D, Liu C


EMDB Unreleased entry

EMDB-67025:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 3).
Method: helical / : Ma BY, Yao YX, Li D, Liu C

PDB-9xmg:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 2).
Method: helical / : Ma BY, Yao YX, Li D, Liu C

PDB-9xmi:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 3).
Method: helical / : Ma BY, Yao YX, Li D, Liu C


EMDB Unreleased entry

EMDB-73706:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), composite map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R


EMDB Unreleased entry

EMDB-57364:
RNA polymerase II elongation complex with the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57365:
Consensus map for RNA Polymerase II elongation complex with the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57390:
RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57391:
Focused refinement map of core Pol II
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57392:
Focused refinement map of nucleosome in RNA polymerase II elongation complex with the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57394:
Focused refinement map of nucleosome of RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57395:
Focused refinement map of cPIC of RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57401:
RNA polymerase II pre-initiation complex bound to ADP-BeF3 in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P


EMDB Unreleased entry

EMDB-57402:
Focused refinement map of the nucleosome in RNA polymerase II pre-initiation complex bound to ADP-BeF3 in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more