[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 21,980 items for (author: han & p)

EMDB-72725:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-9ya9:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

EMDB-62911:
Cryo-EM structure of apo GPR50 with BRIL fusion, anti-BRIL Fab, and anti-Fab Nb complex
Method: single particle / : Shin J, Cho Y

PDB-9l9o:
Cryo-EM structure of apo GPR50 with BRIL fusion, anti-BRIL Fab, and anti-Fab Nb complex
Method: single particle / : Shin J, Cho Y

EMDB-49589:
A membrane protein with cofactor determined by single-particle CryoEM
Method: single particle / : Suder DS, Gonen S

EMDB-49622:
Structure of photoactivated rhodopsin in complex with a megabody
Method: single particle / : Suder DS, Gonen S

PDB-9nnz:
Structure of rod opsin in complex with a megabody
Method: single particle / : Suder DS, Gonen S

PDB-9noz:
Structure of photoactivated rhodopsin in complex with a megabody
Method: single particle / : Suder DS, Gonen S

EMDB-56238:
In situ cryo-ET subtomogram averaged map of Flotillin complex
Method: subtomogram averaging / : Li D, Lizarrondo J, Wilfling F

EMDB-56295:
In situ cryo-ET tomogram of a lysosomal structure in untreated HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56296:
In situ cryo-ET tomogram of lysosome damaged by LLOMe (0.5mM, 60min) in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56297:
In situ cryo-ET of lysosome damaged by LLOMe (0.5mM, 60min) encapsulated in an autophagosome in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56298:
In situ cryo-ET tomogram of lysosomes in BAPTA AM pre-treated (50uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56300:
In situ cryo-ET tomogram of lysosomes in LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56327:
In situ cryo-ET tomogram of lysosomal structure in untreated rat hippocampal neurons
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-56329:
In situ cryo-ET tomogram of lysosomes in E64d pre-treated (20uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56330:
In situ cryo-ET tomogram of lysosomal structure in LLOMe-treated (0.5mM, 1h) rat hippocampal neuron.
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-55930:
TAF15 amyloid filament fold B variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-55931:
TAF15 amyloid filament fold B variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-55932:
TAF14 amyloid filament fold B variant 3
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56025:
TAF15 amyloid filament fold H (Y38C)
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56026:
TAF15 amyloid filament fold G
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56027:
TAF15 amyloid filament fold F
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56028:
TAF15 amyloid filament fold E variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56029:
TAF15 amyloid filament fold E variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56030:
TAF15 amyloid filament fold D
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56031:
TAF15 amyloid filament fold C variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56032:
TAF15 amyloid filament fold C variant 1 doublet
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56040:
TAF15 amyloid filament fold D prime
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56041:
TAF15 amyloid filament fold C variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9thm:
TAF15 amyloid filament fold B variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9thn:
TAF15 amyloid filament fold B variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9thp:
TAF14 amyloid filament fold B variant 3
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tke:
TAF15 amyloid filament fold H (Y38C)
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkf:
TAF15 amyloid filament fold G
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkg:
TAF15 amyloid filament fold F
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkh:
TAF15 amyloid filament fold E variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tki:
TAF15 amyloid filament fold E variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkj:
TAF15 amyloid filament fold D
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkk:
TAF15 amyloid filament fold C variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkl:
TAF15 amyloid filament fold C variant 1 doublet
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tkz:
TAF15 amyloid filament fold D prime
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

PDB-9tl2:
TAF15 amyloid filament fold C variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-71415:
Yeast Respiratory SuperComplex - deltaQCR6
Method: single particle / : Baker ML

EMDB-71416:
Yeast Respiratory SuperComplex - non uniform refinement
Method: single particle / : Baker ML

EMDB-55572:
Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex
Method: single particle / : Fernandez Carrera J, Pelea O, Gerecke SE, Chanez C, Jinek M

PDB-9t56:
Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex
Method: single particle / : Fernandez Carrera J, Pelea O, Gerecke SE, Chanez C, Jinek M

EMDB-55720:
Cryo-EM reconstruction for n-Tr20U.
Method: single particle / : Mehta R, Glatt S

EMDB-55721:
Cryo-EM structure of nTr20 tRNA
Method: single particle / : Mehta R, Glatt S

EMDB-53252:
Pre-activated 9-subunit COP9 signalosome and neddylated SCF (Skp1-Skp2-Cks1) complex structure
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Shaaban M, Enchev RI

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more