[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,379 items for (author: guan & d)

EMDB-66859:
Colanic acid polysaccharide related protein structures
Method: single particle / : Yihua H, Yanlong H

EMDB-80645:
Colanic acid polysaccharide related protein structures
Method: single particle / : jiao L, Yanlong H

PDB-26gs:
Colanic acid polysaccharide related protein structures
Method: single particle / : jiao L, Yanlong H

PDB-9xgv:
Colanic acid polysaccharide related protein structures
Method: single particle / : Yihua H, Yanlong H

EMDB-55775:
apo state of CydDC in nanodisc
Method: single particle / : Changbin Z, Yongbo L, Lili Y

EMDB-67054:
CydDC in nanodisc with AMP-PNP-bound
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67055:
CydDC in nanodisc with ATP
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67183:
CydDC in nanodisc with heme-bound I
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67273:
CydDC in nanodisc with heme-bound II
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9tby:
apo state of CydDC in nanodisc
Method: single particle / : Changbin Z, Yongbo L, Lili Y

PDB-9xno:
CydDC in nanodisc with AMP-PNP-bound
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xnp:
CydDC in nanodisc with ATP
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xsm:
CydDC in nanodisc with heme-bound I
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xuo:
CydDC in nanodisc with heme-bound II
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-75946:
In situ cryo-ET analysis of mitochondria and autophagosome contact in tauP301S Tg mouse cortical neurons
Method: electron tomography / : Gonzalez CU, Jaber N

EMDB-75947:
In situ cryo-ET analysis of mitochondria and autophagosome contact in tauP301S Tg mouse cortical neurons Supplementary 1
Method: electron tomography / : Gonzalez CU, Jaber N

EMDB-75949:
In situ cryo-ET analysis of mitochondria and autophagosome contact in tauP301S Tg mouse cortical neurons Supplementary 2
Method: electron tomography / : Gonzalez CU, Jaber N

EMDB-76733:
SARS-CoV-2 RNA-dependent RNA polymerase in complex with 4'-FlA nucleotide analogue
Method: single particle / : Park S, Gharpure A, Ward AB

PDB-12sn:
SARS-CoV-2 RNA-dependent RNA polymerase in complex with 4'-FlA nucleotide analogue
Method: single particle / : Park S, Gharpure A, Ward AB

EMDB-77065:
CryoEM structure of AdhE spirosome from Clostridium thermocellum uncovered by visual proteomics.
Method: helical / : Agdanowski MP, Rodriguez JA, Moser T, Evans JE

PDB-13he:
CryoEM structure of AdhE spirosome from Clostridium thermocellum uncovered by visual proteomics.
Method: helical / : Agdanowski MP, Rodriguez JA, Moser T, Evans JE

EMDB-68717:
Cryo-EM structure of Chlamydomonas reinhardtii chloroplast F1Fo-ATP synthase
Method: single particle / : Liu J, Li DY, Guan ZY, Yin P, Yan JJ

PDB-22vl:
Cryo-EM structure of Chlamydomonas reinhardtii chloroplast F1Fo-ATP synthase
Method: single particle / : Liu J, Li DY, Guan ZY, Yin P, Yan JJ

EMDB-52224:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

PDB-9hjq:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

EMDB-53944:
In vitro reconstituted NAA40-NAC bound 80S
Method: single particle / : Guan D, Berninghausen O, Beckmann R

PDB-9rg7:
In vitro reconstituted NAA40-NAC bound 80S
Method: single particle / : Guan D, Berninghausen O, Beckmann R

EMDB-64974:
Cryo-EM structure of the aspartate:alanine antiporter AspT WT Consensus map
Method: single particle / : Nanatani K, Kanno R, Kawabata T, Watanabe S, Hidaka M, Yamanaka T, Toda K, Fujiki T, Kunii K, Miyamoto A, Chiba F, Ogasawara S, Murata T, Humbel BM, Inaba K, Mitsuoka K, Guan L, Abe K, Yamamoto M, Koshiba S

EMDB-64975:
Cryo-EM structure of the aspartate:alanine antiporter AspT WT_TM_Local Refinment
Method: single particle / : Nanatani K, Kanno R, Kawabata T, Watanabe S, Hidaka M, Yamanaka T, Toda K, Fujiki T, Kunii K, Miyamoto A, Chiba F, Ogasawara S, Murata T, Humbel BM, Inaba K, Mitsuoka K, Guan L, Abe K, Yamamoto M, Koshiba S

EMDB-64976:
Cryo-EM structure of the aspartate:alanine antiporter AspT WT_SD_Local refinement
Method: single particle / : Nanatani K, Kanno R, Kawabata T, Watanabe S, Hidaka M, Yamanaka T, Toda K, Fujiki T, Kunii K, Miyamoto A, Chiba F, Ogasawara S, Murata T, Humbel BM, Inaba K, Mitsuoka K, Guan L, Abe K, Yamamoto M, Koshiba S

EMDB-72393:
Insulin Degrading Enzyme Time-resolved O/O state
Method: single particle / : Mancl JM, Tang WJ

PDB-9y0h:
Insulin Degrading Enzyme Time-resolved O/O state
Method: single particle / : Mancl JM, Tang WJ

EMDB-65635:
Cryo-EM structure of CpcL-PBS3
Method: single particle / : Mao ZY, Li ZH, Han GY

EMDB-65729:
Cryo-EM structure of CpcL-PBS2
Method: single particle / : Mao ZY, Li ZH, Han GY

EMDB-65883:
Cryo-EM structure of PSI-CpcL
Method: single particle / : Mao ZY, Li ZH, Han GY

PDB-9w4j:
Cryo-EM structure of CpcL-PBS3
Method: single particle / : Mao ZY, Li ZH, Han GY

PDB-9w7k:
Cryo-EM structure of CpcL-PBS2
Method: single particle / : Mao ZY, Li ZH, Han GY

PDB-9wd5:
Cryo-EM structure of PSI-CpcL
Method: single particle / : Mao ZY, Li ZH, Han GY

EMDB-49955:
Cryo-EM structure of RhCas12f-gRNA-DNA ternary complex
Method: single particle / : Guan K, Ocampo RF, Taylor DW

EMDB-49956:
Cryo-EM structure of OsCas12f-gRNA-DNA ternary complex. State II
Method: single particle / : Guan K, Ocampo RF, Taylor DW

EMDB-49958:
Cryo-EM structure of OsCas12f-gRNA-DNA ternary complex. State III
Method: single particle / : Guan K, Taylor DW

PDB-9nzp:
Cryo-EM structure of RhCas12f-gRNA-DNA ternary complex
Method: single particle / : Guan K, Ocampo RF, Taylor DW

PDB-9nzq:
Cryo-EM structure of OsCas12f-gRNA-DNA ternary complex. State II
Method: single particle / : Guan K, Ocampo RF, Taylor DW

PDB-9nzs:
Cryo-EM structure of OsCas12f-gRNA-DNA ternary complex. State III
Method: single particle / : Guan K, Taylor DW

EMDB-49954:
Structure of Cas12f-MG119-28 State I
Method: single particle / : Fregoso Ocampo R, Guan K, Taylor DW

PDB-9nzo:
Structure of Al3Cas12f State I
Method: single particle / : Fregoso Ocampo R, Guan K, Taylor DW

EMDB-49959:
Cryo-EM structure of OsCas12f-gRNA-DNA ternary complex State I
Method: single particle / : Guan K, Ocampo RF, Taylor DW

PDB-9nzt:
Cryo-EM structure of OsCas12f-gRNA-DNA ternary complex State I
Method: single particle / : Guan K, Ocampo RF, Taylor DW

EMDB-61698:
crRNA-guided surveillance (Csy) complex
Method: single particle / : Wang WH, Guan LL, Du XY, Feng Y

EMDB-61699:
crRNA-guided surveillance (Csy) complex
Method: single particle / : Wang WH, Guan LL, Du XY, Feng Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more